Gene lpp1995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp1995 
Symbol 
ID3116455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand- 
Start bp2257186 
End bp2258220 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content38% 
IMG OID637580692 
Producthypothetical protein 
Protein accessionYP_124309 
Protein GI54297940 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT 
TIGRFAM ID[TIGR01420] pilus retraction protein PilT 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATCG CGGAATTGTT GGCATTTTCA GTTAAAAACA AGTCATCAGA TTTGCATATT 
TCAGCTGGCA TGCCTCCTAT GATTCGTGTT GATGGTGATT TACGCAAAAT TAATTTACCT 
CCATTAGAGC ATAAAGACGT CATAAAGATT ATTTATGACA TAATGAATGA CAGACAAAGA 
AAAGAATATG AAGAGTTTTT TGAAACAGAT TTTTCCTTTG AAATAGCTAA TCTGGCACGG 
TTCAGGGTTA ATGCTTTCAA TCAATCACGC GGCGCCGCTG CTGTTTTCAG AACTATTCCC 
TCTGAAATTC TTAGCATGGA AGATTTAGGA TTACCTACAA TTTTTAAAGA AATGGCCAGT 
TTTTCCAGAG GGCTGGTTCT GGTTACTGGC CCAACTGGAT CAGGAAAAAG TACCACGCTT 
GCAGCAGTCA TCGATTATAT TAATTCAAGT CGTTATGAGC ATATTTTGAC AGTTGAAGAT 
CCCATTGAGT TTGTTCATCA AAGCAAAAAA TGTCTGGTTA ATCAACGTGA AGTGCACAAA 
GACACATTGA GCTTTAATGC CGCTTTGAGA TCAGCGCTAC GTGAAGATCC TGATATTATA 
TTGGTGGGTG AATTACGTGA TTTGGAAACT ATACGCTTGG CAATGACCGC AGCAGAAACC 
GGGCATTTGG TTTTTGGAAC ATTGCATACC AATTCTGCAA CAAAAACAAT AAACAGGATA 
ATCGATGTAT TTCCCGCTGA AGAAAAATCG ATGGTACGCT CTATGCTTTC TGAATCATTA 
CAAGCTGTCG TTGCTCAAAG TTTATTAAAA AAGAATAAAG GTGGTCGGGT AGCGGCGCTT 
GAAATTATGA TGTGTACCGG GGCTATTCGT AATTTAATTC GTGAGGATAA GATAGCGCAA 
ATGTATTCGT CAATTCAAAC TGGTCAAGCC AAAGGAATGC AAACATTGGA TCAACATTTG 
ACTGAATTGG TTAATAAAAA TATTATTTCG AAACACACTG CTCATGAGGC TGCCCTGAAC 
AAGTCATTAT TTTAA
 
Protein sequence
MDIAELLAFS VKNKSSDLHI SAGMPPMIRV DGDLRKINLP PLEHKDVIKI IYDIMNDRQR 
KEYEEFFETD FSFEIANLAR FRVNAFNQSR GAAAVFRTIP SEILSMEDLG LPTIFKEMAS 
FSRGLVLVTG PTGSGKSTTL AAVIDYINSS RYEHILTVED PIEFVHQSKK CLVNQREVHK 
DTLSFNAALR SALREDPDII LVGELRDLET IRLAMTAAET GHLVFGTLHT NSATKTINRI 
IDVFPAEEKS MVRSMLSESL QAVVAQSLLK KNKGGRVAAL EIMMCTGAIR NLIREDKIAQ 
MYSSIQTGQA KGMQTLDQHL TELVNKNIIS KHTAHEAALN KSLF