| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpp1274 |
|---|
| Symbol | lspE |
|---|
| ID | 3116547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Paris |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006368 |
|---|
| Strand | - |
|---|
| Start bp | 1412939 |
|---|
| End bp | 1414423 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637579968 |
|---|
| Product | type II protein secretion ATPase LspE |
|---|
| Protein accession | YP_123598 |
|---|
| Protein GI | 54297229 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
|---|
| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATG AAGAAAAATC ACTTAAAATT CCTTACAGTT TTGCCAAAAG CAATGGAATT
GTTGTGGGAG AAATACAAGA AAATCTGGCT ATTGTCTATC ACTTACCTAA CACACCACTG
CAAGCTTTCG CTGAGATAAA GCGATTATTA CAATGTGAAC TTGATCTAAA ACAAGTCGAT
GAATCCACTT TTCAGCAACA TTTAGCCAAT ATTTACCAAT CTAAATCTTC AATACTGGAT
GCTGCAGAAG GCATGGAAGA AGATATGGAT TTATCCATGT TGGCCAGTCA ACTTCCCGTC
AGTGAAGACT TATTGGAAAA CCAAGACGAT GCCCCAATTA TCCGCTTACT GAACGCTCTG
TTTACCCAAG CGATTAAACA AAAAGCATCT GATATACACA TTGAAACTTA TGAAGACAGA
GTATTGGTGC GCAATCGAAT TGATGGTGTT CTACAAGAGG TCCTTGAAAT TCAACGAGCT
ATCGCTCCTT TGGTCATTTC CAGAGTTAAG GTGATGGCCA AATTGGATAT CGCCGAAAAG
AGAATTCCTC AAGATGGTCG AATTTCATTG CGTATAGGAG GACATAATAT TGATGTCAGG
GTCTCAACTT TACCCTCAAA CCATGGAGAA CGAGTGGTTT TAAGGATATT GGATAAACAA
GCTGCTCAAC TGGATTTAAA TCTTTTGGGT ATGCCTGAAC ATACATTAAA AACAGTACGA
CAAATGATTG CTGAACCCCA TGGCATTATT TTAGTCACTG GCCCAACAGG TTCAGGCAAG
ACAACATCTC TTTATGCTAT GCTCACCGAA CTAAATCAGG TGACTCGTAA TATTTTAACC
ATTGAAGATC CCATTGAATA TGACCTGCCT GGTGTAGGAC AAACGCAGGT TAATACTAAA
GTTCAAATGA CTTTTGCCAA AGGATTAAGG GCCATATTAC GTCAAGATCC GGATGTTGTC
ATGATAGGAG AAATCCGTGA TTTGGAAACG GCTGAAATTG CTGTTCAAGC CAGCTTAACA
GGGCATTTGG TACTATCAAC CCTTCATACC AATACCGCAT TAGGAGCATT AACTCGCCTG
CATGATATGG GAGTTGAGTC TTTTTTATTG TCATCCAGTA TAGTCGGCCT CATTGCGCAA
CGTTTGGTAA GGAAATTATG CTCTCATTGC AAAACACCTC ATGAATTAAG GCAGGAAGAA
AAGGAGTTAA TGGGTCTTAA ACCTGATGCT GATGTATCTC AGGTCTTTGA GCCCAAGGGA
TGCGACTATT GCAACCACTT GGGTTATAAA GGCAGAACAG GAATTTATGA ATTAATTATC
GTAGATGAAA CCCTGAGAGG AATGATTCAT CGTAATGAAA ATATTCAAAC AATGGAAAAT
TATTTACGAC CCGCCACGCC GAGCATACGT GAAGATGGTT TTAAAAGAGT ATTATGTGGC
GATACGTCAC TTGCAGAAAT TTTAAGGGTA ACATCCCAAA ATTAA
|
|---|
| Protein sequence | MENEEKSLKI PYSFAKSNGI VVGEIQENLA IVYHLPNTPL QAFAEIKRLL QCELDLKQVD
ESTFQQHLAN IYQSKSSILD AAEGMEEDMD LSMLASQLPV SEDLLENQDD APIIRLLNAL
FTQAIKQKAS DIHIETYEDR VLVRNRIDGV LQEVLEIQRA IAPLVISRVK VMAKLDIAEK
RIPQDGRISL RIGGHNIDVR VSTLPSNHGE RVVLRILDKQ AAQLDLNLLG MPEHTLKTVR
QMIAEPHGII LVTGPTGSGK TTSLYAMLTE LNQVTRNILT IEDPIEYDLP GVGQTQVNTK
VQMTFAKGLR AILRQDPDVV MIGEIRDLET AEIAVQASLT GHLVLSTLHT NTALGALTRL
HDMGVESFLL SSSIVGLIAQ RLVRKLCSHC KTPHELRQEE KELMGLKPDA DVSQVFEPKG
CDYCNHLGYK GRTGIYELII VDETLRGMIH RNENIQTMEN YLRPATPSIR EDGFKRVLCG
DTSLAEILRV TSQN
|
|---|
| |