Gene lpp0923 details

Gene Information

• Locus tag: lpp0923
• Symbol: ccmF
• ID: 3117355
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: +
• Start bp: 1027980
• End bp: 1029945
• Gene Length: 1966 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637579617
• Product: cytochrome C-type biogenesis protein CcmF
• Protein accession: YP_123251
• Protein GI: 54296882
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1138] Cytochrome c biogenesis factor
• TIGRFAM ID: [TIGR00353] c-type cytochrome biogenesis protein CcmF

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATAAGGTGAA ACAATGATAG CGGAATTAGG GCTGTTTTTT TTGGTTTTGG CTTTAGTGGC 
TTCTTTGATG TTAGCTTTGA TCCCATTGGC GGGTTTGCAA TTCAATCGGA AAGACTGGAT 
TGATTCCTCC AGGAATTATG TCGTGCTGCA ATTTTTATTT GTGGCATGTG CTTACCTATG 
TCTCACGGCC TGTTTTTTGA TGGATGATTT TTCGGTGATC TATGTGCTGA ATAATTCCAG 
CTTATTGCTC CCATGGTTTT ATAAATTTTG TGCTGTGTGG GGTGGGCATG AAGGTTCCAT 
GCTGTTATGG GTCGCTATCC TTAGTTTTTG GATGATCCTG GTTTGTTTTT TTAGCTCAAG 
CCTTGATACG GAAATGCGCG CTCGGGTATT AGTTATTTTA GGTTGGCTAA GTATTGGTTT 
TATTCTTTTT TTGTTAATGA CTTCCAATCC TTTCTTGCGC CAATTTCAAG TATTGAATAC 
ACAGGGCCGT GATCTGAATC CATTGCTGCA AGATCCTGGC TTTTTATTCC ATCCTCCTAT 
GTTGTACATG GGATATGTAG GGTTTTGTGT CGCTTTTGCT TTTGCTATTG CCGCTTTATG 
GGCAGGGAAA GTAGAAACCA GTTGGTCTAA ATGGACCAGA CCCTGGACTC TGGCTGCCTG 
GTGTTGTTTA ACCGCGGGAA TTACTTTAGG CAGTTGGTGG GCTTATAGAG AATTAGGCTG 
GGGTGGTTGG TGGTTTTGGG ATCCTGTAGA AAACGCTTCT TTTATGCCCT GGCTGGTTGG 
TACGGCACTA TTGCATTCTT TGGCAGTTAC AGAGCAACGC CAGCAATTTA AAGCGTGGAC 
CATGTTGCTT GCAATCGCTG CTTTTTCTTT AAGTTTAATT GGTACTTTTC TTGTTCGCTC 
TGGAGTTTTA ACTTCAGTTC ATGCCTTTGC GGTTGATCCT CAGCGGGGAT TATATATTCT 
GGGATTTTTG TTATTCGTCA TTGGGGGTTC TTTAACATTG TTTCTTTTCA GAGCCCAAAC 
CTTGCAAGTC AATAAACATC CTGGCTTATT ATCCCGAGAA AGTGCGTTGT TGTTAAACAA 
TGTGTTTTTA GTGGTTATTA TGCTGACGGT ATTAATGGGC ACGGTTTATC CATTGCTGGT 
GGAAGGGTTA GGGTTAGGTA AATTATCCGT TGGAGCGCCC TATTTTAATG CAGTATTTGT 
TCCATTAATG ATTCCTTTAT TGTTGCTAAT GGGGTTAGGT GTCCGTTTGA AATGGCAGAA 
TGATTGTTGG AGGGATGTCT TCAGAAAGCT AAATCGTATT TTTTTGCTTA GTCTGATATT 
GCCTGTCATT TTACTATTCT GTACCTCAAC TGAAATACAC CTTACAGCCC TTTTGGGATT 
AATTTTGGCA TTCTGGGTTT TGTTGAGTAC TGCTAATGCG GCGTATCACA AAGTCAGGGA 
TAGAGGGGTG GCAGGAGTTG GACAGGCTTA TTGGGGGATG GTTTTGGCTC ATTGTGGTGT 
CGCAGCAACA GTGATTGGCA TTGCTGTTTC TTCAGCTTAT GGCGTACAAG ATGATGTACG 
TATGTCTCCT GGCAAGCAAG TGAATCTGCT GGATTATCAG ATTGGATTCA TTAATCAGAC 
TCCGTTGAAT GGCCCAAATT ACAAAGGGAC AAGGGCTGAG TTTTCAATAC AATATCAGAA 
TAAAACCAGG AAAATTTTTC CTGAAAAAAG AGTGTATACC ATTGGACAAA TGCCAATGAC 
TGAGTCTGCG ATTGATGTTA CTCCTTTCCG AGATATTTAC ATTGCTTTGG GGGAACCACT 
GTCTGAGGAT GCCTGGTCGG TACGTATTTA TTATAAACCG TTGGTCCGCT GGATTTGGGC 
TGGCGGATTT ATGATTTTAG CCGGAGGCGT TTTGGCATTA ACAGATAGAA GGTATTACAG 
AAAAAGGCAA GTAACGGTAA TGTCAGTGCG GGAGATCAAG ATATGA 

 

Protein sequence

MIAELGLFFL VLALVASLML ALIPLAGLQF NRKDWIDSSR NYVVLQFLFV ACAYLCLTAC 
FLMDDFSVIY VLNNSSLLLP WFYKFCAVWG GHEGSMLLWV AILSFWMILV CFFSSSLDTE 
MRARVLVILG WLSIGFILFL LMTSNPFLRQ FQVLNTQGRD LNPLLQDPGF LFHPPMLYMG 
YVGFCVAFAF AIAALWAGKV ETSWSKWTRP WTLAAWCCLT AGITLGSWWA YRELGWGGWW 
FWDPVENASF MPWLVGTALL HSLAVTEQRQ QFKAWTMLLA IAAFSLSLIG TFLVRSGVLT 
SVHAFAVDPQ RGLYILGFLL FVIGGSLTLF LFRAQTLQVN KHPGLLSRES ALLLNNVFLV 
VIMLTVLMGT VYPLLVEGLG LGKLSVGAPY FNAVFVPLMI PLLLLMGLGV RLKWQNDCWR 
DVFRKLNRIF LLSLILPVIL LFCTSTEIHL TALLGLILAF WVLLSTANAA YHKVRDRGVA 
GVGQAYWGMV LAHCGVAATV IGIAVSSAYG VQDDVRMSPG KQVNLLDYQI GFINQTPLNG 
PNYKGTRAEF SIQYQNKTRK IFPEKRVYTI GQMPMTESAI DVTPFRDIYI ALGEPLSEDA 
WSVRIYYKPL VRWIWAGGFM ILAGGVLALT DRRYYRKRQV TVMSVREIKI