Gene lpp0681 details

Gene Information

• Locus tag: lpp0681
• Symbol: pilE
• ID: 3117640
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: -
• Start bp: 732230
• End bp: 732679
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637579384
• Product: type-IV pilin
• Protein accession: YP_123019
• Protein GI: 54296650
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4968] Tfp pilus assembly protein PilE
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCAGTC ATGTACATTT TATGAAGAAT AGCCGTATGA AACAATCCGC GTTTACCCTG 
GTTGAAGTTC TGATCAGCAT GGTCATTATG GGCATTCTGG TTTCAATTGC CTATCCATCC 
TATTTACAAT ATATCCAAAA ATCCCGTCGT GCCGATGCTC ACGCCACATT GACACAAGAT 
CAAATTATTT TAGAACGCTG TTATTCACAG AATTTTTCTT ATGCTGCGGC GTGTGGCGCC 
TTACCAGCAT TTCCTCAAAC AACGCCGAAC GGGTACTATA CTATCAATAT TTCAAACCTG 
ACAGCCACAA CGTATACCTT AACTGCAACC CCTGTTGGAA CTCAAGCCAA AGATACCGAG 
TGTGCCAGCA TGTCAATTAA CCAGGCCAAT GTAAAAACAG CAGTAGATTC CTCCGCTAAT 
GCGCAACCAG AATGCTGGAA TCCCGGTTAA 

 

Protein sequence

MLSHVHFMKN SRMKQSAFTL VEVLISMVIM GILVSIAYPS YLQYIQKSRR ADAHATLTQD 
QIILERCYSQ NFSYAAACGA LPAFPQTTPN GYYTINISNL TATTYTLTAT PVGTQAKDTE 
CASMSINQAN VKTAVDSSAN AQPECWNPG