Gene lpp0418 details

Gene Information

• Locus tag: lpp0418
• Symbol: rpsD
• ID: 3117223
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: +
• Start bp: 467359
• End bp: 467990
• Gene Length: 632 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637579116
• Product: 30S ribosomal protein S4
• Protein accession: YP_122758
• Protein GI: 54296389
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGGAGTAATT AATGGCTAGA TATCTTGGTC CTAAATGTAA ATTATCACGA CGTGAAGGTT 
GTGATTTGTT ACTTAAAAGT GGGGTTCGTG ATCATAAATC CAAGTGTAAA TCTGAAAAAT 
TACCTGGACA GCATGGTGAT AAAAAACCTC GTTTAAATAG TTATGGAATT CAGCTTAGAG 
AGAAACAAAA GATTAGAAGG CTTTATGGGA TTCTTGAAAA GCAATTCCGT AATTATTACA 
AAAAAGCGGC TAGACAAAAG GGTTCTACAG GTGAAAATTT AATGGCCCTA TTGGAAAGAC 
GTTTAGATAA TGTTGTTTAC CGTATGGGTT TTGCCAGTAC ACGTGCTGAA GCTAGACAAC 
TAGTTGCACA TAAGGCAATA CTTGTAAATG ATAAAGTAGT TAACGTACCT TCTTTCTTGG 
TTAATCCTGG GGATACTATA TCAGTTCGAC AAAAGGCTAA AAACCAAGGA CGTATCCAAG 
CTGCTTTAGC TTTATCTGAA CAAAGAGCAC CCTGTGATTG GATTACTGTA GATACTGGTT 
CTTTTAAAGG TACATTTTCT ACAGCACCAA CGTTAATGGA TTTATCTTCA GACTACAACG 
TAAACCTTGT TGTAGAACTT TACTCTAAGT AA 

 

Protein sequence

MARYLGPKCK LSRREGCDLL LKSGVRDHKS KCKSEKLPGQ HGDKKPRLNS YGIQLREKQK 
IRRLYGILEK QFRNYYKKAA RQKGSTGENL MALLERRLDN VVYRMGFAST RAEARQLVAH 
KAILVNDKVV NVPSFLVNPG DTISVRQKAK NQGRIQAALA LSEQRAPCDW ITVDTGSFKG 
TFSTAPTLMD LSSDYNVNLV VELYSK