| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpp0106 |
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| Symbol | rnr/lidP |
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| ID | 3118848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Legionella pneumophila str. Paris |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006368 |
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| Strand | + |
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| Start bp | 112571 |
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| End bp | 114751 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637578806 |
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| Product | hypothetical protein |
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| Protein accession | YP_122457 |
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| Protein GI | 54296088 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGTAAAA AATCCAAAGA TCCCTTTTAT AAGAGGGAAC GCGAAAAATA CGCCGAGCCA
ATTCCAAGCC GGGAATACAT CATGGAAATC CTGGATGAAT ACGGTAGGCC AATGTCTCGC
AGTAAACTGT TTGATAAATT GGATTTGAGC TCTGAGAGCC AGCAGGAGTC CTTGGGTTTT
CGCTTGAAGG CCATGTTGCG TGATGGCCAA ATCATGCAGG ACAGGCGTGG ACGCTTTTGT
TTATTACAAA AAATTAATTT ATTGCGTGGA ACGGTTCAAG GCCATCCTGA TGGGTTTGGA
TTTTTCATCC CGGATGATGG TTCCGAGGAT ATGGTGCTCT CTGCTAAAGA AATGAGGGCT
GTCATGCATG GAGATATGGT GCTTGCCTAT CAATCTGGAT TGGATAGAAG AGGAAGGCCG
GAAGCTAAAA TCCACGAAGT CCTGGAACAT GCGAATACCA CGGTTGTAGG TCGATTTTTT
ACTGATCATG GCGTGAATTT TGTCATTCCT GATAGCAAAC GTCTGACTCA GGATATTTCA
ATTCCCCAAG AATTCATTGG CGAGGCCAAA AATGGCCAAA TAGTACTGGT TGAGTTAATC
GCATATCCTA ACAAGCGTTC GCAAGCTATA GGCAGAGTAA TCCATATTTT GGGTGAGCAT
ATGGCTCCTG GTATGGAAAT TCAGGTAGCA ATTCATGCCC ACGGCATTCC TTTCGAATGG
CCAGATGATG TTCTTGCGGA AGTGGGTAAA ATTCCACAAC AGATTTCCGA GGAACAATTA
AAGGGTCGAA CCGATTTGCG TAATCTTCCT TTTGTAACCA TTGACGGGGA AGATGCAAAA
GATTTTGATG ATGCTGTGTA TTGTTACAAA AAGCCCAAAG GCGGCTTCCA ATTGTATGTC
GCTATCGCAG ACGTCAGTCA CTATGTGGCG AAGGATTCTG CTTTGGATCA AGAAGCAGCA
AGACGAGGAA ATTCAGTTTA TTTTCCCGGT AAAGTGGTGC CAATGCTACC AGAAGCCTTA
TCCAATGGTG TTTGCTCATT AAATCCCCAT GTTGATCGCT TATGTATGGT GGCTGAGTTA
TCGATTACCC AAGAAGGAAA AATATCCCGA TCCCGCTTTT ATCGGGCAGT GATTCATTCT
CATGCTCGTT TGACCTACAC GGCAGTTGGG GCATGGTTGG AACAAGGCAA GACAGATGAA
AAACATCAAG CCTTGTGGCC TATGCTTGAG TCTCTTTATG ATTTATATCA TATTCTGCTC
GATACCCGTA GACTTAGAGG TGCTATGGAT TTCGAGACTA CGGAAACTCG TATCGAATTT
GATGAAAATA AGAAAATAAA ATGTATCGTG CCTGTAATAC GTAATGACGC TCATAAATTA
ATTGAAGAAT GCATGCTGGC AGCGAATGTT GCAACAGCAA GATTTTTAGA AAAGGCTGAA
ATTCCTACTT TATACCGAGT TCATGCGGCT CCTGAAGAGG ATAAAATTAC TGCATTGAGG
CAGTTTTTAG GGGAGCTGGG ATTGTCATTG GGAGGGGGGA GAAAACCTGG ACCCAAGGAT
TTTCAGCGTA CCATGAACAT GATTGGTGAC CGACCAGAGA AGCATCTTAT TGAAACGGTA
ATGCTGCGTT CTTTAAAACA GGCTCAGTAC GTTGAATCGA ATGAAGGTCA TTTTGGTTTG
GCCTATTCCG CTTACACGCA TTTTACATCA CCAATCAGAA GATTTCCTGA TCTATTAATT
CACAGAGCAA TAGGGCATTT ACTGGATAAT CATCCTGTTT ATGAATTTGA GTATAGCCAT
GAAGATATGA ATCGTTTGGG TAAACATTCC TCGATGACGG AGCGCCGTGC TGATGAAGCG
ACCCGGGAAG TGATTACCTG GCTAAAATGC GAGTATATGC AAGACAAATT GGGGCAGGTA
TTTAAGGGTC GAATATCCGC TGTGACCAGC TTTGGTATTT TTGTGGAGCT TGATGAAATT
TATGTGGAAG GCTTGGTTCA TGTCACTTCT TTAAAAAACG ATTATTATAC GTTTGATTCT
GCAAAACATC GTTTAATAGG GGCTCGCGGC GGTCAAGTTT ATCGTTTGGG AGATAAAATG
ACTGTGTTGG TAGCTCGTGT TGATTTAAAC GAACGTAAAA TAGATTTTGA GCCTGTCGAG
GATGAAGTTT GTAATGAATG A
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| Protein sequence | MSKKSKDPFY KREREKYAEP IPSREYIMEI LDEYGRPMSR SKLFDKLDLS SESQQESLGF
RLKAMLRDGQ IMQDRRGRFC LLQKINLLRG TVQGHPDGFG FFIPDDGSED MVLSAKEMRA
VMHGDMVLAY QSGLDRRGRP EAKIHEVLEH ANTTVVGRFF TDHGVNFVIP DSKRLTQDIS
IPQEFIGEAK NGQIVLVELI AYPNKRSQAI GRVIHILGEH MAPGMEIQVA IHAHGIPFEW
PDDVLAEVGK IPQQISEEQL KGRTDLRNLP FVTIDGEDAK DFDDAVYCYK KPKGGFQLYV
AIADVSHYVA KDSALDQEAA RRGNSVYFPG KVVPMLPEAL SNGVCSLNPH VDRLCMVAEL
SITQEGKISR SRFYRAVIHS HARLTYTAVG AWLEQGKTDE KHQALWPMLE SLYDLYHILL
DTRRLRGAMD FETTETRIEF DENKKIKCIV PVIRNDAHKL IEECMLAANV ATARFLEKAE
IPTLYRVHAA PEEDKITALR QFLGELGLSL GGGRKPGPKD FQRTMNMIGD RPEKHLIETV
MLRSLKQAQY VESNEGHFGL AYSAYTHFTS PIRRFPDLLI HRAIGHLLDN HPVYEFEYSH
EDMNRLGKHS SMTERRADEA TREVITWLKC EYMQDKLGQV FKGRISAVTS FGIFVELDEI
YVEGLVHVTS LKNDYYTFDS AKHRLIGARG GQVYRLGDKM TVLVARVDLN ERKIDFEPVE
DEVCNE
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