Gene lpp0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp0078 
Symbol 
ID3117113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand+ 
Start bp80253 
End bp81398 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content39% 
IMG OID637578777 
Producthypothetical protein 
Protein accessionYP_122429 
Protein GI54296060 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAGG GAATTAAATT TCAAATTAAA GAGCATAAAA GAAATCCGCT GTTTGTGTTT 
CTGGTTCTTT TTTTACTGTT TTTTTTAACG GTTATTTTTT ATCGTGTTTA TTCAGCGATT 
ATCTTACGCC AACAAACCAG AGCCGATGAG GTCAATTATG TCAGAGTGCT GACTGCTACT 
CCTCTTAAGG GAACAGAACG AATTATTTTG CCGGGTAATG TGCAAGCTTG GCATGATGCT 
GTTATTTACG CGCGAACGAA TGGATACATT AAGAATTGGT ATGTTGATAT TGGCAGTCAT 
GTAAAAAAGG GGGATTTACT TGCAGTAATT GAAACCCCTG AACTGGATGC TCAACTTCGT 
CAGGCAGAAG CAGATTTAAA TACTGCTATT GCGAATAATC AAATTGCTCA ATCTACCGCT 
AAACGTTGGG TGAATCTGGT AAAATCCAAT TCAGTATCCA AACAGGAGCG CGATGAAAAA 
GTAAGCGACG CTGCCTCGAA ATATGCTCTT GAAGTAGCAG CACGTGCTAA TGTAGATCGA 
TTGAAGGAAC TGGTGAGTTT CGAGAGAGTT ATTGCTCCTT TTGACGGTGT AATTACATCC 
AGGACTACAG ATATAGGTTC ATTGATCAAT GCAGGAAGTA GTGATACCGG TTTACCTTTG 
TTCCAGATAG CTCAAACCAA TCCGCTGAGA ATTTACGTTA AAATTCCTCA GAATTATTCC 
TCACGAATTA CTCCTGATAT GAAGGTCAGC TTGACTTTTG CAGAGCACCC GGGTCAAACC 
TTTCCTGCAC AATTAATTAA AACCGCGCAG GCTATTGATC CAGCAACTCG AACCTTACTG 
GCTCAGTTTA AAGCGGAAAA TAATAATGAA GAACTGCTTG CAGGCGGATA TACGGAAGTC 
ACTTTTACAT TCACCATTCC TAAAAATACA TTTCGTTTGC CGGTAAATAC GCTTTTGTTT 
CAGGCACAAG GATTGCAAAT TGCTGTAGTT GATAAAAATA ACCAGGTCGT TTTAAAGCCA 
ATAACAATCA GTCGTGATTT TGGCAATGTA GTAGAAATTG ATCAGGGAAT AAACGCAGGA 
GAAAAAATTA TTCTTAATCC CTCTGATTCT ATAATAAATG GTGAACTCGT TAAGGTTGTT 
TCATGA
 
Protein sequence
MLKGIKFQIK EHKRNPLFVF LVLFLLFFLT VIFYRVYSAI ILRQQTRADE VNYVRVLTAT 
PLKGTERIIL PGNVQAWHDA VIYARTNGYI KNWYVDIGSH VKKGDLLAVI ETPELDAQLR 
QAEADLNTAI ANNQIAQSTA KRWVNLVKSN SVSKQERDEK VSDAASKYAL EVAARANVDR 
LKELVSFERV IAPFDGVITS RTTDIGSLIN AGSSDTGLPL FQIAQTNPLR IYVKIPQNYS 
SRITPDMKVS LTFAEHPGQT FPAQLIKTAQ AIDPATRTLL AQFKAENNNE ELLAGGYTEV 
TFTFTIPKNT FRLPVNTLLF QAQGLQIAVV DKNNQVVLKP ITISRDFGNV VEIDQGINAG 
EKIILNPSDS IINGELVKVV S