| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpl1310 |
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| Symbol | lspJ |
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| ID | 3114532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Legionella pneumophila str. Lens |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006369 |
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| Strand | - |
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| Start bp | 1467423 |
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| End bp | 1468040 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637583083 |
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| Product | type II secretory pathway protein LspJ |
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| Protein accession | YP_126660 |
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| Protein GI | 54294245 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAAAA ATAAAGGATT TACACTGATT GAGATATTAA TTGCTCTTAC TGTTTTTGCT
ATATTAGCAA CTATTACCTC CTCAACCTTA TACTACGCAT TCAATACTCG AACTCGAGTT
AACGCGCAGG CTGAACGCTT AAATGCACTG CAGCTGGCAA TAAGTATCAT TCAACAAGAT
ACTTCCCAAA CAGTGGAACG TGCTATAAGA GGTAATGAAA TGCGCCTGTT TCCAATATTT
GTTGGTCAAC CCCAATACCT TGAACTCACC AGGGATGGGG TAGTAAACCC CAATAGTGCT
GAAAAACGCA GTACCTTGGA ACGAGTCGCG CTTGTTTGCC AGGATAGCAA ATTACTGCGC
CGCACATGGA ATACTTTAGA TCCTATAGAC AGAAATATCT ATAAAGACAA AGTACTTCTG
GATAATTTGT CTGAATGTCA TTTCAACTAT TTAAATCAAA ATTTACAGCT TCTCTCCGAG
TGGCGAGAAC AGGCAGTCAA TCAAAATCAG CAAAGAGAAC CTCTTCCCAA AGCAATCCAA
ATGAATCTCA CTTTAAAGGA CTGGGGAGAT ATGAACATGC TTTTTATCAT ACCCGGAGCA
CTCTATGTTT ATGAGTAG
|
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| Protein sequence | MIKNKGFTLI EILIALTVFA ILATITSSTL YYAFNTRTRV NAQAERLNAL QLAISIIQQD
TSQTVERAIR GNEMRLFPIF VGQPQYLELT RDGVVNPNSA EKRSTLERVA LVCQDSKLLR
RTWNTLDPID RNIYKDKVLL DNLSECHFNY LNQNLQLLSE WREQAVNQNQ QREPLPKAIQ
MNLTLKDWGD MNMLFIIPGA LYVYE
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