| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpl1274 |
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| Symbol | lspD |
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| ID | 3114730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Legionella pneumophila str. Lens |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006369 |
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| Strand | - |
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| Start bp | 1418393 |
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| End bp | 1420768 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637583046 |
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| Product | type II protein secretion LspD |
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| Protein accession | YP_126624 |
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| Protein GI | 54294209 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTCGA TAGTAATTAT ACTTTTAGCC TTCGTTTGTT GTTCATTAGT ACGTGCTAAT
GATGTCAATA TTTCAACCGT AACCAAAGAT GGCAATACAT TTTTTTATCT TCAAGCTGGC
GCCTATAATC TCGAAAAAGA CGCTAAAATA CGTCAAAATG AACTTGCCAA ATTAGTCGAT
CAAAAAGTTG AAATTAAAAA CCTGGCTGAC AAACATCTTT ACCTTGTGCA GATTGGTCCA
ATTGATGATT ACCCAACTGC AAGAGCACTC AAAGAAAAAT TATCTCAAAA AACAGAAAGG
CAGTTTAATC AAATTAACAA AAACCAAACC TCTTCACTTG AGGTAAGCCA ATTGCCTAAA
AATATGGAAC AAGCGCAAAC AGCTCCTCCA GGTAGTAAAT TATGGAATTT ACGTAACGCT
GATATTAGAG CCGTAATCGC AGAAGTCTCT CGAATTACAG GTAAAAATTT TGTTATTGAT
CCCAGAGTAC AAGGAAAAGT ATCGATTGTT TCATCAACGC CGTTATCCAG CCGCGAGCTA
TATCAAGTCT TTCTCTCAGT ACTGCAGGTA TCAGGTTATG CCGCAATACC TAACGGAGAA
ATTATCAAAA TTATTCCCAA TATTGATGCA AAAACACAGT CACCTGATTT ACTCAGTGGA
ATGAAGAGTC CTCCACGAGG TGACGATATG ATGGTCGCCG TAATACCCGT TCATTATGTT
CCTTCTGAAC AGCTGGTACC TGTTCTAAGG CCACTAATGC CCCAATGGAG CAGCGTATCT
GCCTATGCTC CTTCTAATAT GTTGATCCTG TCTGGTCGAG CAAACAATAT TAAAAGCCTT
GCGGAAATTA TCAAACAAGT AGATAGCTCA AGTGCAAACG GCATAGACAT GGTTCGTTTA
CATCATGCTT TGGCTATGGA TGTTGCAAAC ACTTTAAAAG ACCTGGTTAA AACTCAACCT
GGTATCGGCA GCAGAACACA AATTACCATT GCTGCAGATG ACCGTTCCAA CTCAATTTTA
GTCAGTGGGA GCAAGACTGA TAGAATTCGT TTGCGAATGC TTATATTGAA ACTGGATAAA
GACAGTTCAA CAGGAGTCAA TTCAAATACA CAAGTTGTTT ACCTGAATTA CTTAAGAGCC
GAAGATTTAG TCCCCATACT GGCAGGTATA GCCCAAGCCA ATTTCAGTGG AAATGTAGGA
ACAACCATTG GAACCATTAC AAGACCCGCA TTAGACAGCA CCAACCCTGC TTCCAGTCTT
GCCAATACAT CTGCCGATGG ACAAAGCTCT TCATTAAGCT CAACTTCGAC CAGTTCCGCC
CCTATGAATG CGTCAGGAGC AACAGCAAAT ACAACATCAG CAAGTACTCA AAATGAAGGC
TCTACCAAGC CTACTGTACA GATAATAGGA GAACCGAACA CTAACTCTAT TATTCTTAAT
GCACCTGCTT CAATTATTCG CACTCTAAAA ACAGTCATTT CTCAGCTAGA TATAAAACCA
GCTCAACTAT TAATTGAGGC CCTCGTTGCT GAAGTGGATG AAAAGGACGT TAACAATCTG
GGAATAGAGT GGGGTTCAAA TCAACAAACA GGCAATCCCA AGGATTTCAG ACCAGGCTTT
GCCATTATAA ACAGTAAAAC CAGGATTGAC GATTTCCAGG CTCAAATTTA TGCCTTGGCA
AGAGAGCAAA GAGCAAATAT TTTATCAACT CCCTCCGTAG TAGTCCTTGA TAATCGTCAA
GCAAAAATAC TCATAGGTAA ACAGGTCTCA ATAGCAACAA CCAGCTACCC CAATAATGCA
GGAGGCACTA CCACAGCAAG TCCTTTCACA ACATTTGACA GGGTTAACGT TGCTTTGCAC
CTTTATGTAA GGCCACAAAT TACTCGCGGA CAAGGAATTC AACTACAGAT TGATCAAGGG
AATGATACTT TGGATCCAGC GACTTCTACA ACAGACAACA CAACAACCCC CACTTTTAAT
ATCAGCAGTA TTGTAACTTC AGTTCATGTA GAAAGTGGTG ATGTTGTAGT ACTTGGAGGA
TTAATTCAGG ACAGTATTGG AAATGACAAT AATAAATTAC CCATTTTAGG AGATATACCT
GGAATAGGCA GATTGTTCCA ACGTAACATT CGCAATAGAG ACAAGCGAGT GCTTATGGTA
TTTATTAAAC CTATCATATT ACGCAACGAA AGAGATAACT TGCATGTCAC TGGCGAAAAA
TACAATTATG TCCGCCAATA TCAGCTGGAT TGGATTCGAT CTCAAGAAGC TTTTGAACAA
ACAGATGATG AAACAGTATT GCCCCCATTA ACTCAAGGTA ATCTACCAGT ACCTTTTAGT
ACTCCTCCCC AATACTCATC AAAAATGACC AAATAA
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| Protein sequence | MRSIVIILLA FVCCSLVRAN DVNISTVTKD GNTFFYLQAG AYNLEKDAKI RQNELAKLVD
QKVEIKNLAD KHLYLVQIGP IDDYPTARAL KEKLSQKTER QFNQINKNQT SSLEVSQLPK
NMEQAQTAPP GSKLWNLRNA DIRAVIAEVS RITGKNFVID PRVQGKVSIV SSTPLSSREL
YQVFLSVLQV SGYAAIPNGE IIKIIPNIDA KTQSPDLLSG MKSPPRGDDM MVAVIPVHYV
PSEQLVPVLR PLMPQWSSVS AYAPSNMLIL SGRANNIKSL AEIIKQVDSS SANGIDMVRL
HHALAMDVAN TLKDLVKTQP GIGSRTQITI AADDRSNSIL VSGSKTDRIR LRMLILKLDK
DSSTGVNSNT QVVYLNYLRA EDLVPILAGI AQANFSGNVG TTIGTITRPA LDSTNPASSL
ANTSADGQSS SLSSTSTSSA PMNASGATAN TTSASTQNEG STKPTVQIIG EPNTNSIILN
APASIIRTLK TVISQLDIKP AQLLIEALVA EVDEKDVNNL GIEWGSNQQT GNPKDFRPGF
AIINSKTRID DFQAQIYALA REQRANILST PSVVVLDNRQ AKILIGKQVS IATTSYPNNA
GGTTTASPFT TFDRVNVALH LYVRPQITRG QGIQLQIDQG NDTLDPATST TDNTTTPTFN
ISSIVTSVHV ESGDVVVLGG LIQDSIGNDN NKLPILGDIP GIGRLFQRNI RNRDKRVLMV
FIKPIILRNE RDNLHVTGEK YNYVRQYQLD WIRSQEAFEQ TDDETVLPPL TQGNLPVPFS
TPPQYSSKMT K
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