| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpl0518 |
|---|
| Symbol | rpoN |
|---|
| ID | 3115909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Lens |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006369 |
|---|
| Strand | - |
|---|
| Start bp | 564866 |
|---|
| End bp | 566260 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637582294 |
|---|
| Product | RNA polymerase factor sigma-54 |
|---|
| Protein accession | YP_125884 |
|---|
| Protein GI | 54293469 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
|---|
| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGA CATTGCAGAT TGGTATTGGT CAACATCTCA CGTTAACCCC ACAACTGCAA
CAAGCCATAA GACTGCTGCA ATTATCCACC TTTGATTTAC AGCAAGAAAT TCAACTCGTT
GTTGAATCAA ATCCTTTGCT TGAAGCCACT CCTGTTGAAG AAAAAGAAGA CGCCCAAATA
AATACCAATC AGAACCATGA TGAATATTCA GATTTTCAAT GGTCTCAACT GTATAATAAC
TTAAACAAGC GCAATAATTT TGAAGAAAAC GATTACAATT TTGATAATTT ACACTGCACC
ACCACCAATT TACAAGATCA TCTTAACTGG CAACTTGACC TGACGCCTAT GAGCGATATT
GACCGAGTCA TTGCTACAAC AATTATTGAT GCGATAAACG ATGACGGCTT TTTAACTATA
CCCGTTGCTG AAATTCACGC CAGCTTAAAT AGCGATGATT TCCCTCTGGA TATAGAAGAA
ATAGAAGCAG TGAGACACAG GCTTCAATTA TTTGACCCCG TAGGATGCGC ATCTGTTAAT
TTAGCAGAAA CTCTCGTTTT GCAATTGGAA CAACTTCCAC TGGAACCCAA GCTTTTGGCT
ACTGCGAAGA AAGTCATTCT TGAAGACATT GAGTTGCTAG GGCAACATAA CTACAGACAA
CTCATGAAAA ATCATCAAAT AAGTGAAAAA ACAATTCATG AAATATTACA AGTCATTCAT
AAATTAAATC CAAAACCAGG AAGTTTGATC CATCAAGATA ATATTGAATA TGTTATTCCC
GACTTAACTG TTAAAAAGAT AGATAATCAA TGGAAAGTTT TTTTGAATCA AGATATTCTT
CCCAGGCTGA GTATCAATAG TCAATATGCC GCTTTAATCC AACGTGCAAA CAATAGTCTG
GATAATCAAT TCTTAAAGCA TAATTTACAA GAAGCACGTT GGTTTTTAAA AAGTATTCAA
AGCCGTCAGG AAACACTTCT AAAAGTAGCA ACCTGTATCA TGGAATACCA ACATGGATTT
CTGGAATTTG GTGAAGAAGC GATGAAACCA TTAATATTGA ATGATGTAGC TTCTGCCTTG
GATATGCATG AATCAACGGT ATCAAGAGTT ACAACTCAAA AATTTATTAA CACTCCTAGA
GGTGTTTTTG AGTTAAAGTA CTTCTTCTCC AGCCATGTCA ATACTGATAA CGGAGGAGAA
TGCTCTTCCA CCGCAATCCG AGCGGTAATA AAAAAATTAA TTTCAGCAGA GAATAGAAAA
AAACCTTTGA GTGATAGTAA AATTGCCCAA CTAATAGGTG AGCAAGGCAT TAAAGTAGCA
AGACGTACTG TTGCCAAATA TCGCGAAGCA ATGGGGATTC CCCCATCCAA TGAAAGAAAG
GTTATTAGTA GTTAA
|
|---|
| Protein sequence | MKPTLQIGIG QHLTLTPQLQ QAIRLLQLST FDLQQEIQLV VESNPLLEAT PVEEKEDAQI
NTNQNHDEYS DFQWSQLYNN LNKRNNFEEN DYNFDNLHCT TTNLQDHLNW QLDLTPMSDI
DRVIATTIID AINDDGFLTI PVAEIHASLN SDDFPLDIEE IEAVRHRLQL FDPVGCASVN
LAETLVLQLE QLPLEPKLLA TAKKVILEDI ELLGQHNYRQ LMKNHQISEK TIHEILQVIH
KLNPKPGSLI HQDNIEYVIP DLTVKKIDNQ WKVFLNQDIL PRLSINSQYA ALIQRANNSL
DNQFLKHNLQ EARWFLKSIQ SRQETLLKVA TCIMEYQHGF LEFGEEAMKP LILNDVASAL
DMHESTVSRV TTQKFINTPR GVFELKYFFS SHVNTDNGGE CSSTAIRAVI KKLISAENRK
KPLSDSKIAQ LIGEQGIKVA RRTVAKYREA MGIPPSNERK VISS
|
|---|
| |