| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpl0004 |
|---|
| Symbol | gyrB |
|---|
| ID | 3113577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Lens |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006369 |
|---|
| Strand | + |
|---|
| Start bp | 4034 |
|---|
| End bp | 6451 |
|---|
| Gene Length | 2418 bp |
|---|
| Protein Length | 805 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637581783 |
|---|
| Product | DNA gyrase, subunit B (type II topoisomerase) |
|---|
| Protein accession | YP_125383 |
|---|
| Protein GI | 54292968 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
|---|
| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAG ACGCCAGTTA TGATTCAAAT AATATTAAAG TCCTAAAAGG TTTAGACGCA
GTAAGAAAAA GACCGGGCAT GTACATTGGG GATACAGATG ATGGGACCGG TTTGCATCAT
ATGGTTTTTG AGGTTGTAGA TAATTCAATA GATGAATCCC TGGCAGGTTA TTGCAAGGAA
ATTTTTGTTA CCATTCATAG CGATGAATCA ATTACCGTTA AGGATGATGG TCGTGGTATT
CCTGTCGATA TTCATAAGGA AGAAGGAAAA TCAGCTGCTG AAGTCATTAT GACAGTCCTG
CATGCCGGAG GTAAATTTGA TGATAACTCT TACAAGGTAT CAGGCGGTCT ACATGGAGTA
GGGGTATCTG TGGTGAATGC CCTTTCAGAA GAGTTGCATT TGCTAGTGCG TAGACATGGA
AAAGTGTATG AGCAACACTA CAGGCATGGT GTTCCTGAAT CTCCAATTGC TGAAACTGGA
GAAGCCAACT CTACTGGCAC ACAAATATGG TTTAAACCAA GCGCTGAAAC CTTTTCTAAT
ATTGAGTTCC ATTACGACAT TCTAGCTAAA AGATTACGTG AATTGTCATA CCTGAATTCA
GGCGTTTGTA TTCACTTATT TGATGAAAGA ACACAGAAAA AAGACACGTT TCACTACGAA
GGCGGCATCA AAGCCTTTGT TGAGCACTTA AATAAAAATA AGACACCAGT CCACCCCGTT
GTTTTCTCAA TGACATCGGA AAAAGACGGT ATCGTCATTG AACTGGCCAT GCAATGGAAT
GATGGTTATC AAGAAACCAT ATTTTGCTTT ACTAACAACA TCCCGCAAAG GGATGGTGGA
ACACATATGG CCGGCTTTAG AGCAGCATTA ACGCGCACTT TAAATAATTA CATTGAAAAC
GAAGGGTATG CCAAAAAGGC AAAAGTATCT CCAACAGGTG ATGATGCTCG CGAAGGATTA
ACAGCTGTTC TTTCAGTGAA AGTCCCTGAT CCCAAGTTTT CATCGCAAAC AAAAGATAAA
CTGGTTTCAT CTGAAGTAAA ACCAGCAGTA GAATCTTGTG TTGCTGAAAA ATTTAACGAC
TTTCTTTTAG AAAATCCCAC GGCAGCAAAA TCCATCGTAG CAAAAATTAT TGATGCAGCA
AGAGCTAGAG AGGCAGCGCG GCGTGCTCGT GAAATGACTC GACGTAAAGG GGCTTTGGAT
ATTGCCGGTT TACCAGGTAA ATTAGCTGAT TGCCAAGAAA AAGACCCATC GCTTTCCGAG
TTGTATTTAG TTGAGGGTGA CTCTGCAGGA GGCTCAGCAA AACAAGCGCG AGACAGAAAA
TTCCAGGCTA TTTTACCTCT TAAAGGCAAG ATTCTTAATG TTGAAAAAGC CCGGTTTGAC
AAGATGCTTT CTTCTCAAGA AGTAGCCACT TTGATTACTG CATTAGGCTG TGGAATTGGT
CCTGAGGAAT ATGATCCAGA TAAAGTACGT TATCATAGAA TCATCATTAT GACAGATGCT
GATGTGGATG GGTCCCACAT AAGAACTTTA CTTCTTACCT TTTTCTATAG ACAAACCAGA
GAACTATTGG AACGAGGATA TATTTATATT GCACAACCAC CTTTGTATAA AGTAAAGCGT
GGAAAACAGG AGCAATATGT TAAAGATGAT GAAGCGTTAT TTGATTATCT AACTCAGTGC
GCATTGGATG GGGCGACATT TTATCCCGCC AAAGAGGTTC CACCCATATC TGCCAAATCG
CTGGAAGAAT TGGTTCAACA TTTCAGACGT GTTGAGAAGA TTATAAAGCG GTACAAGAGA
AGATATCCCA GCGATATACT AAAAAGAGTA GCTTATATGC CAATGCTGCA CCAAGAAGAT
TTTAACAATC TGCCAAAAAT TGAAAACTGG TGCAGACAAT TACACTTAAG CTTACAACAA
GTAGACAGTA AAACAGAACA ATACAAAGTA GATATCCAAA AACTTACAGA AGGTAATCAA
TACACCCCAA AAATTACTGT GTACCAGCAT GGCTTGGAAA ATGATATTCC AATGCAAGTT
GAATTTTTCT TGTCTAAAGA TTACAAAGAA ATGGTTGATT TAGGACATAA ATTGTCGAAT
TTAATAGAGG AAGGCGCCTA TATTCAGCGT GGAGATAAAT CCTTGCCTGT GGAAAATTTT
GAGCAAGTAC TTAATTGGCT AATGGATGAA GCAAAAAAAG GACAAACAAT TCAACGCTAT
AAAGGTCTTG GGGAAATGAA CCCTGAGCAG TTATGGGAAA CAACCATGGA TCCCGAGGTT
AGACGAATGT TGCAAGTGAG CATTGAAGAT GCCGTAGCTG CGGATGAAAT TTTTACCACC
TTAATGGGCG ACAATGTAGA ACCAAGAAGA GATTTTATTG AATCGAATGC TTTAGACGCT
GAAAACATTG ATATTTAA
|
|---|
| Protein sequence | MSVDASYDSN NIKVLKGLDA VRKRPGMYIG DTDDGTGLHH MVFEVVDNSI DESLAGYCKE
IFVTIHSDES ITVKDDGRGI PVDIHKEEGK SAAEVIMTVL HAGGKFDDNS YKVSGGLHGV
GVSVVNALSE ELHLLVRRHG KVYEQHYRHG VPESPIAETG EANSTGTQIW FKPSAETFSN
IEFHYDILAK RLRELSYLNS GVCIHLFDER TQKKDTFHYE GGIKAFVEHL NKNKTPVHPV
VFSMTSEKDG IVIELAMQWN DGYQETIFCF TNNIPQRDGG THMAGFRAAL TRTLNNYIEN
EGYAKKAKVS PTGDDAREGL TAVLSVKVPD PKFSSQTKDK LVSSEVKPAV ESCVAEKFND
FLLENPTAAK SIVAKIIDAA RAREAARRAR EMTRRKGALD IAGLPGKLAD CQEKDPSLSE
LYLVEGDSAG GSAKQARDRK FQAILPLKGK ILNVEKARFD KMLSSQEVAT LITALGCGIG
PEEYDPDKVR YHRIIIMTDA DVDGSHIRTL LLTFFYRQTR ELLERGYIYI AQPPLYKVKR
GKQEQYVKDD EALFDYLTQC ALDGATFYPA KEVPPISAKS LEELVQHFRR VEKIIKRYKR
RYPSDILKRV AYMPMLHQED FNNLPKIENW CRQLHLSLQQ VDSKTEQYKV DIQKLTEGNQ
YTPKITVYQH GLENDIPMQV EFFLSKDYKE MVDLGHKLSN LIEEGAYIQR GDKSLPVENF
EQVLNWLMDE AKKGQTIQRY KGLGEMNPEQ LWETTMDPEV RRMLQVSIED AVAADEIFTT
LMGDNVEPRR DFIESNALDA ENIDI
|
|---|
| |