Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_B0114 |
Symbol | |
ID | 5384191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009705 |
Strand | + |
Start bp | 126571 |
End bp | 127365 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640857223 |
Product | putative type IV secretion system protein IcmL/DotI |
Protein accession | YP_001393412 |
Protein GI | 153930677 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATCAG ATAAAGAGAT AAAAGAAGAG GTATTGCCTA AAGAATTAGA AGAGAATACT GGGCACAACG ACCCCATATC TCATCAAGAA GCACTAGAAC GCAAGCACGA GACGCTGGCA TCCGATGTAT CAGCCGATAC CCCTTCAGCG GCTACATTAC GGGAGGTCAA TAGGCTCCAG TTAGACAATA TATTGCTAAA ACGTAAGAAC ATACGAATCT GGGGTGCATC TGCCATTCTT GCAGCAGGTC TCATTGTCAC TATCGGGATC ACCACTTTTT GGTTTCCCAA ATTTAAATAT ATCCCCACAA CAAACAACCA AGCCATATGC AGTGTTGAAG GAGCTAATGC TCCTTTAGTC ACCACTGAAA CCATCATTGC TTACGCTCAG GAAGCCGTGT TGCATTCATA TTCTTATGAT TACGTGAACT ACCGGACAAA ACTAAATGAA GTCGCTAACA AATATTATAC CGACAACGGC CGCAGAGCTT TTTTCAACTC TCTGGATAAA TCAAAAAATC TGGAAAAAGT TAAAGAAGGT CGCCTCATCC TCCGTTCTAT GCCCGTACAA GTTGCACAAT TAGAGGAAAC CGGCCTTACC GCATTGAATC AGAAATACTG GATCGTACAA GCCCCTATAT CAATAGAATT CTATTTAGGT GGTGAAACCA AACCACGAAC TAAATCAGAA TTTACTGCCG CCGTCACTGT TTTGCAAATC CCTGCAACTG CAATAAACCA AAAAGGCATT GCTATTGATT CTGTCAGCCT CGAACCGTAC ATACCGAGGA ACTGA
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Protein sequence | MSSDKEIKEE VLPKELEENT GHNDPISHQE ALERKHETLA SDVSADTPSA ATLREVNRLQ LDNILLKRKN IRIWGASAIL AAGLIVTIGI TTFWFPKFKY IPTTNNQAIC SVEGANAPLV TTETIIAYAQ EAVLHSYSYD YVNYRTKLNE VANKYYTDNG RRAFFNSLDK SKNLEKVKEG RLILRSMPVQ VAQLEETGLT ALNQKYWIVQ APISIEFYLG GETKPRTKSE FTAAVTVLQI PATAINQKGI AIDSVSLEPY IPRN
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