Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_B0093 |
Symbol | |
ID | 5384255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009705 |
Strand | - |
Start bp | 104452 |
End bp | 105609 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640857202 |
Product | DNA-binding protein |
Protein accession | YP_001393391 |
Protein GI | 153930753 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 0.569679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAC AACGTAAAAA ATTACCACAA TCCTTAACTG CATTTGTAAA AGAAATTAAA AAAACTGAAG ATCATCGCGC CAAGCGAACT GATGATGGAT TTTATATTGA TCCTCGATTG ATTAAAATTG ATCCCAACTT TAATACTCGC GCTGAAGGTT TTGATAGTTT CGAAGAATTT GTTGCTTTAG ATGAAAACAG AGCATACATC AATCGTTTAA AAAAAGCATA TAAAGATGGC AGTTTGCTCC CTCCGGCTCT AATAGTTCAA GTCATTGATG GAATTGCTTA CCTTCGTGAC GGTAATTGCC GTCTTTATTC AATTCTTGAA CTTATTTCTG AGGGAACAGA CATTTCACTT ATTCATGTTA CCGAGAATAA GGGTGATGAA GAAAAGCAAG ATATGCTTAT TCTTACATCC CAAGATGGTT TGAAGGTAAC TGCTTTAGCA CAGGGGCGTG TATACCAACG AATGATGAAT CATGGTTGGG ACGAAAAACG AATTGCTGAA TGGCGCGGTT GTACGGTAAA TCAAGTTAAA AATATCTTAG AATTACTGAG TTTGCCAAAA CGTTTGAAAT ATTTTATTGC TACCAATATC ACCTCTTGGA CAAATACTCT AGATGTCTAC AGAGAGTTTG GGGCTGAAAA AGCAATACAG CAAATAGAAG CGGTACTTAC AATTAAAGAA AGAGAACAGG CAGAAAGACG TGACAAACTT ATAGCAGAGA AGTCAACATC CGAAACTCAG GGTACAGAGG GAAGTGAATC TGGAAGTAAT AACACCCCTG AAGATAACGG TATCCAGCCA AAACAGCAGC GTCGTGCTTT AATTAAGCCT AGTGATTTAA AACCTAAACG TTTACCTAAA GGCATGGTTG ATAAAGTACA TGATAGCGTA TCAAAATTAA CTTTCCTCAC TAATGATGAC AGTATTATTG TTGAGGAGGG CGCATCAGAA GTACAGGTTG TTATTCCCGT AGCCGAATTT GAAATGTTGC GTGAAATGAA AGCCATGTTA GATAAGTTCG ATGAGGACAA TTTAAAAGCG TTGGGTGTAG TTACTGAAAC AGATCCATCG ATCCCCCTAG AAGATGGTGG TCAAACTGAG ACGAATGATT CAGAACAGGC CCAGCAGACC AGTGCTAATG CTGCTTAA
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Protein sequence | MNEQRKKLPQ SLTAFVKEIK KTEDHRAKRT DDGFYIDPRL IKIDPNFNTR AEGFDSFEEF VALDENRAYI NRLKKAYKDG SLLPPALIVQ VIDGIAYLRD GNCRLYSILE LISEGTDISL IHVTENKGDE EKQDMLILTS QDGLKVTALA QGRVYQRMMN HGWDEKRIAE WRGCTVNQVK NILELLSLPK RLKYFIATNI TSWTNTLDVY REFGAEKAIQ QIEAVLTIKE REQAERRDKL IAEKSTSETQ GTEGSESGSN NTPEDNGIQP KQQRRALIKP SDLKPKRLPK GMVDKVHDSV SKLTFLTNDD SIIVEEGASE VQVVIPVAEF EMLREMKAML DKFDEDNLKA LGVVTETDPS IPLEDGGQTE TNDSEQAQQT SANAA
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