Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_B0050 |
Symbol | |
ID | 5384209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009705 |
Strand | - |
Start bp | 54197 |
End bp | 55375 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640857159 |
Product | hypothetical protein |
Protein accession | YP_001393348 |
Protein GI | 153930712 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 0.105275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGTTT ATCATATCAG CACTCGAATT AGTTCGAATG TTTCACCGAA TGACATCCTG TATGATTTGT GTATTTATCG GATGGACTCA TCGAGGAATA AATATATTAT TGTGGATGCG AAACAGCAAC CACTACAGAG CAATTACGAA ACACAGCCCC ATGCTACAAA GAATATTGAT GATCCTCTTT CGACTATCTA TATTATGGAA GTGATGCTTT ATCGTAAAAC GATGCTGCAT ACCCATTGTG TTTCATCAAT GCCATTTACA AAGATGTATA CGTTGCAGGA ATTAAGTTCA GGGAAAGCCA GTTCTCAGGT AAAACGCGAA AACCCCTGTT ACTTTGAAAC AAAAGGCACG ACAAAACCGG AAAGTGAGGG CGGTAATACA GTCATTCTTA ATATATCTAT ACCGGAAAGA CCTTTTATTG CAAAGGAATA TCCTATTGGC AACGTCCGTG ATCCCTTTGA AAAAAACACA ATAGCGCGAC AAATAAAAGA CAGGTTTGAA CAGGTTGATT TCCCCAATCA AATTGCTGCA AGCGTGTGCG GGCCTGCGGC ATTTTTTTAC TGTCTGCAAA AAGACCGACC CGATGTATAT GCACAGGCAG CAAGAGATTT ATGGCATTAC GGGAAAACCA AAATAGGAGA ACTTAATATT GCTCCTAGTG AGGGTTGCCG ACATCCGTCT GGAGCGTTCT ATACCGATCA AGGCTATATG AAAATATCAG GACTTGACTG GATCACCTTA GCTGGTCTGA GAGATTCGGA GAATGCTGTG TTGAGTTTTG ATGCTCTGGA CTCACCTGTC GCAGGTATCA CGATGTGGGG AACCCTATCT CAATGGTTTG AGAAAGCTGG CTATGAAAAA GTATTCAGCA ATGTCGGTGT CACTCAGGCT GGAGTGCGGG GGATTAGGGA TTTAAATGAG TATGTTAAAA AAGGCTATAA AGTAGTCACT TTAATTAATG ATGGGCTTTT GGAGGGAAGT AATTCAAATT TAACAGTGCC GACACATTGG GTTGTCTGGG AAGGGCCAGT GACTGAGGAT GCTAACGGCC ATGTCCACTT AGAATTATTT TCATGGGGAA AGGTGTCTGA TTGGATTAAA AAGGGTGAAA ATACGTCATT CTTTGTCTAT AGATTTTTTG GGGGGATGGT TTTTAAGCCA TTAAAATAG
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Protein sequence | MPVYHISTRI SSNVSPNDIL YDLCIYRMDS SRNKYIIVDA KQQPLQSNYE TQPHATKNID DPLSTIYIME VMLYRKTMLH THCVSSMPFT KMYTLQELSS GKASSQVKRE NPCYFETKGT TKPESEGGNT VILNISIPER PFIAKEYPIG NVRDPFEKNT IARQIKDRFE QVDFPNQIAA SVCGPAAFFY CLQKDRPDVY AQAARDLWHY GKTKIGELNI APSEGCRHPS GAFYTDQGYM KISGLDWITL AGLRDSENAV LSFDALDSPV AGITMWGTLS QWFEKAGYEK VFSNVGVTQA GVRGIRDLNE YVKKGYKVVT LINDGLLEGS NSNLTVPTHW VVWEGPVTED ANGHVHLELF SWGKVSDWIK KGENTSFFVY RFFGGMVFKP LK
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