Gene YpsIP31758_B0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_B0040 
Symbol 
ID5384262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009705 
Strand+ 
Start bp46146 
End bp46808 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content49% 
IMG OID640857149 
Producthypothetical protein 
Protein accessionYP_001393338 
Protein GI153930654 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0000011341 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT TAGAAGAGTT GAAGGCCAAG AAACCCGATG ATTTAAAGTC AGGATCATCT 
ATTGAGGCTG GTTACGTCAC CGATAACAAT TCAGGCGGCT TCTTCGTTGT CGAATGCAAT 
AATTGTGGCG AAGTTTTCCC TAGCCAACAA TTGGATGGCG GCGGTGCGAT CGCTGATACT 
GGCGATTATG ACGATGCTTA TTGCCCGCAC TGTAATGCAG TTGACCCAGA TGAGTGCTAC 
AACGCGGGCC TAGTCTGGAA TGTTCAGCAG GCCAAGATAA CCGCGCTAAT ATCCCAACGG 
GAAGCGGCAC AGAAAGAACG TGATGAAGCG ACGCGACGAT TGAGCCGCTA TTCAATGAGC 
GCTGGAGAAG CAGACCAGCG CATGTGTGAA AGCCGCGCTG TTCGTCATGA GCTGGGTTTT 
GGTACAGATG CGAATAACGT CGCGCCTCTT GATTTAAGCA ATGCCATCGT AGATCTGCGC 
GATAAGTTAT CAGCGGCAAA CGATATGCTG AGTAAGCCCG TCGAATTCCC TGATTGTGAT 
ATTGGCGCAG CTTCACACAT GGCTCACCGG TATTCAGAAA AGCAATGTGA AGCATGGGTG 
GCTGGCGTTG AGTTTAGTAA AAAACAAATC ATCAAAGCCG GTTTCACGGT AGAGGGCGAG 
TGA
 
Protein sequence
MNKLEELKAK KPDDLKSGSS IEAGYVTDNN SGGFFVVECN NCGEVFPSQQ LDGGGAIADT 
GDYDDAYCPH CNAVDPDECY NAGLVWNVQQ AKITALISQR EAAQKERDEA TRRLSRYSMS 
AGEADQRMCE SRAVRHELGF GTDANNVAPL DLSNAIVDLR DKLSAANDML SKPVEFPDCD 
IGAASHMAHR YSEKQCEAWV AGVEFSKKQI IKAGFTVEGE