| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_B0033 |
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| Symbol | |
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| ID | 5384155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009705 |
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| Strand | + |
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| Start bp | 38031 |
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| End bp | 40478 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640857142 |
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| Product | putative DNA topoisomerase III |
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| Protein accession | YP_001393331 |
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| Protein GI | 153930698 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 0.448865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCACA AATCTCTTAT TATTGCAGAG AAGCCCTCGG TTGCTTTTGA TATAGCAAAG
GCTCTTGGGG GCTTCCAAAA GAAAGATAAC TTTTTTGAAA GTGATCGCAT TATTATTAGT
AATGGAATTG GACATTTAGT TGAAGTGTAT TCAACCGAAA TGGACGCTGA AGGTACTAAA
GACTTATCCG CACTTCCTGT TATTCCCTCC CATTTTCAAG TAAAGCCAAA ACCTAAAACG
ATATCTCAAT TTAATTTGTT GAAAAAACTC ATGAACCGGC CTGATGTTGG CAGCGTTATT
AATGCTTGTG ATGCTGGACG TGAAGGTGAA TTAATTTTTC GCCTAATCTA TGAAGCTATC
GGTAGCCGTA AACCGATGAA GCGGATGTGG ATCAAATCAA TGACGCCAAC GGCGATCCGT
GAAGCTTACG AGAACATCAA AGATGGTCGC TTTTATGATC GCGTCGATGA CGCCGCAAGA
TGCCGTACTG AAGGTGATTT CATTGTCGGC ATCAATGCCT CCAGAGCCAT TACCGCTTTT
AAATCACGTC AAGAACGCTC ATTCCAAATG CTGGCAGCGG GACGAGTACA AACACCTGTC
CTCTCGATGA TTACCCAGCG GGAAGATGAA ATCCGTTCCT TTGTGCAAAG AACCTTTTGG
GAAGTGATGG CCACATTTAC CCTTGCGTCT GGTGAGTATA ATGGCCGCTG GATTCCGGCA
AAAAGCACCA ACAGTAATCA AGAGAGTGAT GGCTCGCGAT TCTTTGATCA AAGTGCGGCG
AAAGCAATAT TGGATAAATG TCGGGGCGTA GAGCCGACGA GTGTTACCGA AGTATCAAAA
ATAACAAAGT CACATCCACC CAAACTATTC AATCAAACTG CACTGCAAAT TGAAGCCAAC
AAACGATATA AGTTCTCGGC AAAGAAAACT CTGGACTTAA CGCAAGCACT GTATGAAAAA
CATAAAATGG TCAGTTACCC GCGCACATCA TCTACCGCTT TGCCTGAAGA TTATGGCGAC
ACAGTATTAT CAATAATGAC CCACCTATTC ACGGGCAGTG AATACGAAAA ATATGCTGCT
TACGTCACTA CTCATAACCG GATAGATCCC TCGAATAAAA CTATCTTTGA TAATGATGAG
ATAAGCGACC ACTTCGCCAT TATTCCAGCT ATCGGTTCTC AGTGTAATGT TGCTGGCTTA
ACCCCTGATG AACTAAAAAT CTACGACCTC ATTGTACGCC GCTTTATCGC CGCGTTTTAT
CCTGTGGCTA CCTACAGTGC AACTGAGCGC CTGACTATTG TCGCAGAGGA AAGCTTTAAA
ACAACAGGCC GCGTCTTGCT AGAGACTGGT TGGCAAGCCG TTATCAAACA ACCGACCGAC
AATGCCACGA ACTCGCTTTG CGCATTAAAA GAGGGGGAAA CTGCCGGCAA CAAGGTTATG
GGATTAAAAA CGGGCAACAC CACACCACCG TCACGCTTTA ACGTCGCTAC ATTGCTGGCC
GCTATGCAAA CAGCAGGCAA ACTTGTTGAT GACGATGATC TGGCTAAAGC AATGAAAGGG
TGTGGCCTCG GAACAGATGC CACTCGTGCG GGTATCATTG AAGGGCTGTT AAGCAATAAA
ACAGCGGCGG GTAATGCCAA AGAACCCTAC ATCGTCATTG AAGGCAAAGA ACAGCTTTTT
GTCCCAACGC CAAAAGCTAT GGACTTGATC TCATTCTTAA GAGACAACAA TGTGTTGATG
CTCACTAACC CGACAATGAC GGGTGAGTGG GAACAAAAGT TAAGCCTAAT GGAACACGGA
AAGTATAACC GACAGACCTT CATGGCTGAA ATTGCTGAGA ATACACGGCA GATGATCGAC
ACCATCAAGG TTCGTGCCAG CGAAATACCA GCCGAACCAC ACAGAGATTT TGCGGGTGCT
AAATGCCCTA AATGTCCATC GGCACTGATA TCAACTCAAC GCACGGTCAC CTGTTCAGCG
GAGTGCGGTT TTAAACTGCG TCGTAGTCAA TTTGGTCGAG ACTGTACAGA TCATGAGTTG
GCCATATTGA TCAACCAAGG TAAAAGCCCG TTCTTTGATG ACTTCATCAG TAAAAATAAA
AAGCCTTATA GCGCCCAACT GATCTTGCAA CCCAATTATG AAGTGACTCT AAGTTTTGAT
AATCCAACGG TTGCAAAAGG AGAAGCACTC TCTACAGCTT GCCCAAGCTG CCAAGGTGAA
ATCAATTTAT TGATGGGTAA CTACCCAAGC TATAAATGCG GAAAATGTGC TTTCAAACTC
AATAAAGTCA TCGCAGGGCG GGCATTAAGT GATGATGAGG CTATTAGCTT AATTACTCAT
GGTTATCTGG GTAATAAATC CGGCTATACA GGGAAAAAAG GGAAATTCAG TGCTGGCCTC
AATTTAGATA AAAAGACCGG AAGTATCACC TTTAAATTCG AAGGTTAA
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| Protein sequence | MSHKSLIIAE KPSVAFDIAK ALGGFQKKDN FFESDRIIIS NGIGHLVEVY STEMDAEGTK
DLSALPVIPS HFQVKPKPKT ISQFNLLKKL MNRPDVGSVI NACDAGREGE LIFRLIYEAI
GSRKPMKRMW IKSMTPTAIR EAYENIKDGR FYDRVDDAAR CRTEGDFIVG INASRAITAF
KSRQERSFQM LAAGRVQTPV LSMITQREDE IRSFVQRTFW EVMATFTLAS GEYNGRWIPA
KSTNSNQESD GSRFFDQSAA KAILDKCRGV EPTSVTEVSK ITKSHPPKLF NQTALQIEAN
KRYKFSAKKT LDLTQALYEK HKMVSYPRTS STALPEDYGD TVLSIMTHLF TGSEYEKYAA
YVTTHNRIDP SNKTIFDNDE ISDHFAIIPA IGSQCNVAGL TPDELKIYDL IVRRFIAAFY
PVATYSATER LTIVAEESFK TTGRVLLETG WQAVIKQPTD NATNSLCALK EGETAGNKVM
GLKTGNTTPP SRFNVATLLA AMQTAGKLVD DDDLAKAMKG CGLGTDATRA GIIEGLLSNK
TAAGNAKEPY IVIEGKEQLF VPTPKAMDLI SFLRDNNVLM LTNPTMTGEW EQKLSLMEHG
KYNRQTFMAE IAENTRQMID TIKVRASEIP AEPHRDFAGA KCPKCPSALI STQRTVTCSA
ECGFKLRRSQ FGRDCTDHEL AILINQGKSP FFDDFISKNK KPYSAQLILQ PNYEVTLSFD
NPTVAKGEAL STACPSCQGE INLLMGNYPS YKCGKCAFKL NKVIAGRALS DDEAISLITH
GYLGNKSGYT GKKGKFSAGL NLDKKTGSIT FKFEG
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