Gene YpsIP31758_B0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_B0002 
Symbol 
ID5384243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009705 
Strand
Start bp596 
End bp1870 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content40% 
IMG OID640857111 
Producthypothetical protein 
Protein accessionYP_001393300 
Protein GI153930720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value0.691922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTCA ATCCTGATGC TTTAAATAAT AAAAGTTCAT CGAGTAATAC TGCTAATCCA 
GCGCCTCAAA AACCTGAGCG TTTAATTATG ATTGTGGAAA GCTATGAAAC TCCTGAAAGT
GGTTTTCATT ATGCAGTTGG CCATAAATTT AATGATATCG ATGCGAAAGT ACGTGTGCGT
CTGAATACAG TTGATGAGCG TTGTAAAGAT CGTCCTAAGT CGGACGCGAA TAAAGTTAAA
GATCAGTATG TATCCGGTGA AAACACAAGA GATACAATTG CTGACAAACA AAAATCAAAT
ATTAAATTTA TTTCTTTTGA TGATTCTACT CTTCTTGCTG AGAATGAAGG GGTGAGTGAG
TATCGCGCCC ACTGGGGAAA AACGATGTCA ACTGATCCTA CTGCTGAAAT TATTTCAGGG
GTAGGGCATA TCCGCCTACG GCAACCGGAA AATGGTTCTG AACGAAGTGC AGAAGCCTAT
ATTGAATTCA TTAAAGACGC ACAACCTGCG GTAAAGAAAA ACATCAAGCA GTTACTGACT
AGTGGGTTGG CGACTAAAGA TGAACAGGGG CGAGCACGAG ATCCCTTTGT CATCCTGCGT
GTGGGCTATG ACGATAAATT AGTGACGACT GTCCGACTGT TTCCTGCCAC AGAGACTAAA
GCTGTTTTTG ACCAGAATTT GGGGTCAAAT AAAGAAATTA GGATTCCTGC GGATGCAGAT
AAAACGATTG AACATCTTTT GTCAGGTAAT CCACTAAGCA ACAGTCCTAC AACTTCATAT
GTTGATAATC AAGCTGATAC CGTTCGCGCT ATTGTTGCAG GATTGTTGGG ACGAAAAGAA
CCAACATTTA ATGTGCCATC AAATAAAGAC CGTAACCTAA ATATCTATCA TGGTGCCAAA
GGGGGTCAGT TGAATTTTGA ATTGATCTCC TGTGAAAAAA TTGATTTTGG CATTGATAGT
CGTAAAACAT ACCTTAATGA TAAATCGCGA CCTCATCTCG CCGCTTATGA CATCAAGTCA
GGTGATGAAG GTAACGATAA ACAACAATTT GTGACGTCTG GCTATACCGA AACGGTACTT
GCCATTCATC GTCATCCCGA TGGTGAACCC TATGCTGTGT TTGCATCGCC AAAAGAGATG
TGGCCTAAAA CACAGATTAT GAAAAACTTG ACCATCGATA AATTAATTAT TACGACGCCT
GAGAATAAAC CAGTACACGA AGAGGAGAAG AGTGCCAAGG TAAATAAAGA AGAAGATCGT
TCGTTGTCGC TCTAA
 
Protein sequence
MSFNPDALNN KSSSSNTANP APQKPERLIM IVESYETPES GFHYAVGHKF NDIDAKVRVR 
LNTVDERCKD RPKSDANKVK DQYVSGENTR DTIADKQKSN IKFISFDDST LLAENEGVSE
YRAHWGKTMS TDPTAEIISG VGHIRLRQPE NGSERSAEAY IEFIKDAQPA VKKNIKQLLT
SGLATKDEQG RARDPFVILR VGYDDKLVTT VRLFPATETK AVFDQNLGSN KEIRIPADAD
KTIEHLLSGN PLSNSPTTSY VDNQADTVRA IVAGLLGRKE PTFNVPSNKD RNLNIYHGAK
GGQLNFELIS CEKIDFGIDS RKTYLNDKSR PHLAAYDIKS GDEGNDKQQF VTSGYTETVL
AIHRHPDGEP YAVFASPKEM WPKTQIMKNL TIDKLIITTP ENKPVHEEEK SAKVNKEEDR
SLSL