| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_A0047 |
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| Symbol | |
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| ID | 5384085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009704 |
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| Strand | + |
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| Start bp | 6020 |
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| End bp | 7120 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640857053 |
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| Product | conjugal transfer ATPase TrbB |
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| Protein accession | YP_001393242 |
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| Protein GI | 153930606 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 0.435739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCAGC TAAAGCCTCC AATAGGGAGG CTTTTTTATT ATCATAAAAC AAACAAAATA
TCCGTTGTTC TTGCGCCAGC AAAATTTTCG TTATATCGTA TATGGCACCT AATTATGCTA
TCAAACGAGA ATTCCGGCAT CATGCAACCT AACGTTGAAG AAACATCAAT AGGCTCCAGA
GCAAAAGAAA AGCTGCGTAG AGACTTAGGG CCACTCATCA TTGATGCTCT CGAAGATAAG
ATGACCGCCG AAATTATGCT CAATCCTGAT GGCAAATTAT GGATTGAAAC ATTTGGTAAG
CCCATGCGCC ACATCGGGGA TCTTTCTTTC GTAAGAGCTG AAGCCATTAT AAAAACTATC
GCTGGTTATC ACGGTAAAGA GATAACCACT CTAAAACCAA CGCTTGAGGG TGAACTGCCT
ATTGACGGTT CACGTTTTGC AGGACAACTC CCACCAGTAG TTAGCGGCCC AACTTTTGCT
ATACGCAGAA AAGCAGTATC AATCTTCACT CTTACTCAAT ATGTAGAAAG CAACGTAATG
ACAGCGCATC AAAGCGAAGT CATTAGAAAT GCGATCAGAG ACCATCGAAA TATTTTGGTT
ATTGGTGGCA CCGGCTCCGG TAAAACCACA CTTGTAAACG CCATTATCAA TGAAATGGTC
GTATTCGATC CCAGCGAACG AGTTTTCATC ATTGAAGACA CCGGAGAAAT CCAGTGTGCC
GCTGAAAATT GTGTTCAATA TCACTCAACC CTAGAAGTCA CGATGACGAT GTTACTAAAA
ACCACATTAC GTATGCGGCC AGACCGCATT CTGGTAGGTG AGGTTCGCGG TGCAGAAGCA
TTAGATCTTC TCGATGCTTG GAATACTGGC CATGAAGGAG GAGCAGCAAC CCTACATGCA
AACAATGCGT TAAGTGGTTT AACCCGATTG AAATCTCTTA TCTCTCGTAA TTCGTCAGCA
CCAGCGGAAA TAGAACCCCT TATTGCAGAG GCGGTTCACA TAATAATTCA TATAAGTCGT
ACTCCAGAAG GTCGCCGCAT ACAGGAAGTT GTTGAAGTTT CAGGTTATGT GGACGGCAAA
TATATTACTC GCAATCTTTG A
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| Protein sequence | MYQLKPPIGR LFYYHKTNKI SVVLAPAKFS LYRIWHLIML SNENSGIMQP NVEETSIGSR
AKEKLRRDLG PLIIDALEDK MTAEIMLNPD GKLWIETFGK PMRHIGDLSF VRAEAIIKTI
AGYHGKEITT LKPTLEGELP IDGSRFAGQL PPVVSGPTFA IRRKAVSIFT LTQYVESNVM
TAHQSEVIRN AIRDHRNILV IGGTGSGKTT LVNAIINEMV VFDPSERVFI IEDTGEIQCA
AENCVQYHST LEVTMTMLLK TTLRMRPDRI LVGEVRGAEA LDLLDAWNTG HEGGAATLHA
NNALSGLTRL KSLISRNSSA PAEIEPLIAE AVHIIIHISR TPEGRRIQEV VEVSGYVDGK
YITRNL
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