Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_A0031 |
Symbol | |
ID | 5384094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009704 |
Strand | + |
Start bp | 51860 |
End bp | 52300 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640857103 |
Product | conjugal transfer protein TraM |
Protein accession | YP_001393292 |
Protein GI | 153930592 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0000000000000204915 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATG AAATAGACGA ATTAATAAAA GATATTGCAT TAAAGAACGG GGTAGCTATT GACCGTGACG ATCCAATAAT GATTTTGCAA ACTATGCAAT TGCGATTTTT GGCTGGTAAT AAAAAAGCAC AGGTAGAAAT GCTTGATGAG TTCAAAGAGG AGTTAGAAGG AGTGGCTTCT CGTTGGGGGC TTGAGTCAAA ATCCTTGGCT GAAAAAATAC TTAATAACTC ACTTAAAGCC AGTAAAGAAA CAATGGCTAT TCAGTTACAA GAAAGTGTCC AGGCGACATC CAGGGCTGTA GGAAGTGAAA TTGAAATTAA ATTGGCTTGC TTGAATGAAC CGGTTCAATG GGCCAAAAAG ATAGCTATCT ATAATTTAAT TGCTTCACTT GTGACGTTTT TAACTGCATG TATGATTATT GTTTTTTTCT TATTCAAATA A
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Protein sequence | MTDEIDELIK DIALKNGVAI DRDDPIMILQ TMQLRFLAGN KKAQVEMLDE FKEELEGVAS RWGLESKSLA EKILNNSLKA SKETMAIQLQ ESVQATSRAV GSEIEIKLAC LNEPVQWAKK IAIYNLIASL VTFLTACMII VFFLFK
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