Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_A0005 |
Symbol | |
ID | 5384122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009704 |
Strand | + |
Start bp | 28986 |
End bp | 29492 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640857077 |
Product | transglycosylase SLT domain-containing protein |
Protein accession | YP_001393266 |
Protein GI | 153930583 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 67 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATA TAGCTCAGGG ATTTATATTG ATACTAACGT TATTAGTGCC ACTAAGTAGT TATGCATATT GCTTTCAAGC AGCTGGTGAC ACTTATCAAA TAGACCCTTT ATTGCTTATA TCTATCGCTG ATGTAGAAAG TAGTATGAAT TATAAAGCTA TCGGGCAAAA TAAAAAGAAT GGCGTAGTGA AGTCAGAAGA CCTTGGGCTA ATGCAGATAA ATACATCTTG GCTACCAAAG CTAGGGAAAT CATTCGGTAT TACTCGTGAG CATCTATTAA ATAACCCCTG TCAGAATGTT TATGTCGGGG CTTATGTTTT AGCAAATAAC ATATCTAGCA ATGGTGTTAA TTGGGAGTCA ATTGGTGCTT ATAACGCCGG TTTTAAAAGC GCGAATGAAG AGTTTAGGCT TAGGTATGCT AAAAAAGTAT ACAGTAAATA CATAAATTTA TTGCGTGGCA ATAGAGCGAT AATTATTGCC AAGGCAAGTC GAGGCGAACG GGTATAA
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Protein sequence | MKDIAQGFIL ILTLLVPLSS YAYCFQAAGD TYQIDPLLLI SIADVESSMN YKAIGQNKKN GVVKSEDLGL MQINTSWLPK LGKSFGITRE HLLNNPCQNV YVGAYVLANN ISSNGVNWES IGAYNAGFKS ANEEFRLRYA KKVYSKYINL LRGNRAIIIA KASRGERV
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