Gene YpsIP31758_4186 details

Gene Information

• Locus tag: YpsIP31758_4186
• Symbol: gidA
• ID: 5386316
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: -
• Start bp: 4721057
• End bp: 4722946
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640867214
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_001403128
• Protein GI: 153948674
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000000000000226366
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTATC CAGATCAATT TGACGTCATC ATCATCGGTG GTGGCCATGC AGGCACCGAA 
GCCGCCATGG CCGCGGCACG CATGGGACGT CAGACCTTAT TGCTGACGCA CAATATCGAT 
ACTCTGGGGC AAATGTCTTG TAACCCAGCA ATCGGCGGTA TCGGCAAGGG GCACTTGGTC 
AAAGAAATTG ATGCTCTGGG TGGCCTGATG GCGAAAGCAA CAGACCTCGC GGGGATCCAG 
TTTAGGATAC TAAACGCCAG CAAAGGGCCT GCGGTAAGAG CAACCCGCGC TCAGGCTGAC 
CGTGTTCTGT ATCGTTTAGC GGTACGAACG GCATTGGAGA ATCAACCTAA CTTGATGATC 
TTCCAGCAAC AGGTTGAAGA TCTCATTGTT GAAAATGATC GTGTCGTTGG CGCAGTCACA 
CAAATGGGTC TGAAATTCCG TGCCAAAGCG GTGGTGCTAA CTGTTGGTAC CTTCCTTGAT 
GGCAAAATAC ATATTGGGCT AGAAAATTAC AGTGGTGGCC GTGCCGGTGA TCCCCCTTCG 
ATCTCATTAT CACAACGCTT ACGTGAACTG CCTTTGCGAG TAAATCGCCT TAAAACGGGC 
ACTCCACCAC GTATCGATGC GCGAACTATC GACTTTAGCC AATTAACACC TCAGTTGGGT 
GATACGCCAA TTCCAGTATT CTCTTTCTTG GGAAATGCTG AACAACATCC TGAACAAATG 
GCTTGTCATA TCACCTACAC CAATGAAAAA ACACATGAAG TGATCCGCAA TAACCTGGAT 
CGCAGCCCAA TGTATGCAGG GATCATCGAA GGGATCGGCC CACGTTACTG CCCATCGATC 
GAAGATAAAG TCATGCGTTT TGCTGATCGT AATTCACATC AGATCTTCCT CGAACCAGAG 
GGGCTAACCA GTAACGAGAT CTATCCGAAC GGCATTTCTA CCAGTTTGCC TTTCGATGTA 
CAGATGCAAA TTGTCCGCTC AATGAAAGGG TTGGAAAATG CACGTATTAT TCGTCCCGGC 
TATGCTATCG AATATGATTT CTTTGATCCT CGCGATTTAA AACCGACTCT GGAAAGTAAA 
TATATTCAAG GCTTGTTCTT TGCGGGACAA ATCAATGGCA CAACGGGCTA CGAGGAAGCT 
GCGGCTCAAG GGCTGCTTGC AGGGCTTAAT GCGGGCCGTT TTGCCAACGA GGAGGACGGA 
TGGTCACCTC GGCGTGATGA AGCTTACCTT GGCGTGCTGG TGGACGATTT AAGCACTCTC 
GGCACTAAAG AACCGTACCG TATGTTTACC TCCAGAGCTG AATACCGTTT GATGCTGCGT 
GAAGATAACG CTGATCTACG CCTGACTGAA ACAGGCCGCA AATTGGGATT AGTGGATGAT 
ATCCGGTGGG CACATTTCAG CCAAAAAGTT GAACAAATTG AAAAAGAGCG CCAACGGCTG 
CGTGATATCT GGGTGCACCC GCATTCTGAG AATGTTTCAG AGATCAATGC GCTGCTGAAA 
GCACCTTTGT CCAAAGAAGC CAACGGAGAA GAGCTACTGC GTCGGCCTGA AATAGACTAT 
CGTTTGTTGA CCTCTTTGAC ATCATTTGGC CCAGCGTTGA CTGATCCACA ATCGGCTGAT 
CAAGTTGAAA TTCAAGTCAA ATATGAAGGG TATATTACTC GTCAGCAGGA AGAGATCGAA 
AAACAACTAC GCAACGAAAA TACCTTATTG CCCGTTGATC TCGATTATCA GCAAGTCTCA 
GGTTTGTCGA ATGAAGTCAT TGCCAAATTG AATGACCATA AACCCAGTTC AATTGGTCAG 
GCATCCCGAA TTTCAGGTAT TACCCCCGCG GCAATATCTA TCTTACTGGT TTGGCTGAAA 
AAACAAGGAT TGTTGCGCCG CAGTGCGTGA 

 

Protein sequence

MFYPDQFDVI IIGGGHAGTE AAMAAARMGR QTLLLTHNID TLGQMSCNPA IGGIGKGHLV 
KEIDALGGLM AKATDLAGIQ FRILNASKGP AVRATRAQAD RVLYRLAVRT ALENQPNLMI 
FQQQVEDLIV ENDRVVGAVT QMGLKFRAKA VVLTVGTFLD GKIHIGLENY SGGRAGDPPS 
ISLSQRLREL PLRVNRLKTG TPPRIDARTI DFSQLTPQLG DTPIPVFSFL GNAEQHPEQM 
ACHITYTNEK THEVIRNNLD RSPMYAGIIE GIGPRYCPSI EDKVMRFADR NSHQIFLEPE 
GLTSNEIYPN GISTSLPFDV QMQIVRSMKG LENARIIRPG YAIEYDFFDP RDLKPTLESK 
YIQGLFFAGQ INGTTGYEEA AAQGLLAGLN AGRFANEEDG WSPRRDEAYL GVLVDDLSTL 
GTKEPYRMFT SRAEYRLMLR EDNADLRLTE TGRKLGLVDD IRWAHFSQKV EQIEKERQRL 
RDIWVHPHSE NVSEINALLK APLSKEANGE ELLRRPEIDY RLLTSLTSFG PALTDPQSAD 
QVEIQVKYEG YITRQQEEIE KQLRNENTLL PVDLDYQQVS GLSNEVIAKL NDHKPSSIGQ 
ASRISGITPA AISILLVWLK KQGLLRRSA