| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4179 |
|---|
| Symbol | atpH |
|---|
| ID | 5384516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 4716992 |
|---|
| End bp | 4717525 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640867207 |
|---|
| Product | F0F1 ATP synthase subunit delta |
|---|
| Protein accession | YP_001403121 |
|---|
| Protein GI | 153949432 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
|---|
| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0000101182 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAT TTGTAACTGT AGCTCGCCCC TACGCCAAAG CAGCTTTTGA CTTTGCTGTT
GAGCACCAGG CAGTTGAGCG TTGGCAGAAT ATGCTGGCGT TTACTGCCCA AGTGACTCGC
AATGAACAGA TCGCTGAATT ACTTTCCGGT GCTGTAGCGC CAGAGACAAT GTCGACGACG
TTTATTGCAG TCTGTGGTGA TCAGCTCGAT GAGCCCGCAC AGAACTTCAT TCGAGTTATG
GCGGAGAATG GCCGTTTACT GGTTCTTCCT GAGGTGTTAC AGCAGTTTAT TCAACTGCGT
GCCTCATTGG AGTCTACCGT CGACGTTGAA GTGTCCTCTG CGAGAGCACT TAACGACGAA
CAGCTAGCGA AAATTGCTGC TGCGATGGAA AAACGTCTGT CACGCAAAGT TAAGCTGAAT
TGCAAAATTG ATAAGTCTGT AATGGCCGGC GTAGTAATAC GTGCAGGCGA TATGGTGATA
GATGGCAGCG TTCGCGGTCG TCTTGAACGC CTGGCAGACG TCTTGCAGTC TTAA
|
|---|
| Protein sequence | MSEFVTVARP YAKAAFDFAV EHQAVERWQN MLAFTAQVTR NEQIAELLSG AVAPETMSTT
FIAVCGDQLD EPAQNFIRVM AENGRLLVLP EVLQQFIQLR ASLESTVDVE VSSARALNDE
QLAKIAAAME KRLSRKVKLN CKIDKSVMAG VVIRAGDMVI DGSVRGRLER LADVLQS
|
|---|
| |