Gene YpsIP31758_4128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_4128 
SymbolmtlA 
ID5386100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4659378 
End bp4661309 
Gene Length1932 bp 
Protein Length643 aa 
Translation table11 
GC content51% 
IMG OID640867157 
ProductPTS system, mannitol-specific EIICBA component 
Protein accessionYP_001403071 
Protein GI153948113 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2213] Phosphotransferase system, mannitol-specific IIBC component
[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain 
TIGRFAM ID[TIGR00851] PTS system, mannitol-specific IIC component 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCAC CAGACGCAAA GGTCAGGGTC CAAAACTTTG GCCGATTCCT AAGCAATATG 
GTCATGCCCA ATATCGGCGC ATTTATCGCT TGGGGCATTA TCACCGCACT GTTTATTCCA
ACCGGCTGGC TGCCCAATGA AACCTTAGCC AAACTGGTTG GCCCGATGAT TACCTATCTG
TTGCCACTGT TGATCGGTTT TACCGGTGGC CGTTTGGTAG GCGGAGATCG CGGTGGTGTA
GTCGGTGCCA TCACCACCAT GGGGGTGATC GTTGGTGCGG ATATGCCAAT GTTCCTCGGT
GCGATGATTG TCGGCCCGCT GGGTGGCTGG GCAATTAAAC ATTTTGACCG CTGGGTTGAA
GGTAAAATCA AAAGCGGCTT TGAGATGTTG GTTAACAACT TCTCATCCGG CATCATTGGT
ATGTTGCTGG CTCTCCTGGC CTTTATGGCG ATTGGTCCGT TGGTTGAAGT CCTGTCTAAA
GGGCTGGCTT ACGGTGTGGA TGTCATGGTG CAGAATAATC TGTTGCCACT CGCATCGATC
TTCGTTGAAC CGGCAAAAAT TCTCTTCCTG AATAACGCTA TCAACCACGG TATCTTCTCA
CCACTGGGTG TCCAGCAAGC CGCTGAAACC GGTAAGTCTA TCTTCTTCTT GATCGAAGCA
AACCCAGGAC CGGGGTTGGG TGTGTTGATG GCGTATATGT TCTTCGGCAA AGGTAATGCT
AAGCAGTCAG CTGGCGGTGC CGCTATCATC CATTTCTTCG GTGGTATCCA CGAAATTTAT
TTCCCTTATG TGCTGATGAA CCCTCGCTTA CTGTTGGCGG TGATTCTGGG CGGTATGACA
GGTGTGTTCA CCCTGACACT GCTGAACGGC GGGCTGGTCT CTGCCGCTTC ACCGGGTTCT
ATTCTGGCAA TATTGGCCAT GACGCCTAAA GGGGCTTACT TTGCCAACAT TGCTGCGGTT
GCCACCGCCT TTGCCGTGTC CTTCGTGGTC TCTGCCATCT TGCTGAAAAG CTCTAAGGCT
AAAGACGATG AAGAGGGCCT TGAAGGCGCA ACTCGCCGTA TGCAAGATAT GAAAGCGCAG
TCTAAAGGTG TTCAGGCGGC CAATGCCGCT GCCGCTGCTG GCGATTTAAG CACAGTGCGT
AAAATTATCG TTGCCTGTGA TGCCGGTATG GGGTCCAGTG CGATGGGGGC TGGTGTTCTG
CGTAAAAAAG TACAAGATGC CGGGCTGAAA CATATTGCGG TGACCAACTG TGCAATCAAC
AACTTACCGG AAGATGTGGA TCTGGTGATC ACGCACCGTG ATTTGACTGA GCGGGCGATG
CGCCATGCAC CGCAGGCACA GCATATCTCG CTGACTAATT TCCTCGACAG CCAACTGTAC
AACAGCCTGA CGGCGGAGCT GCTGCAAGCC AGTCAATTGG TTGATAATAC TAAAGTACAG
AAAGTGATCG AAAAACTGGA CGATAGCTTC GAAGCATTTG AAGATAATTT GTTCAAGTTG
GGGGCGGAGA ATATCTTCCT CAATCAGCAT GCGACAGCCA AAGAGCAGGC TATCCGCTTC
GCCGGTGAAC AGTTGGTCAA AGGTGGCTAT GTCGAACCTG AATATGTCGA GGCGATGCTG
GATCGTGAAA AACTGAGCTC AACGTATCTG GGTGAGTCTA TCGCGGTGCC ACATGGCACG
ATTGAAGCAA AAGATCGTGT GCTGAAGACC GGGGTGGTGT TCTGTCAATA CCCGGAAGGT
GTGCGCTTTG GCGATGAAGA AGATGATATC GCCCGTCTGG TGATTGGTAT TGCTGCTCGT
AACAACGAGC ATATTCAAGT CATTACCAGC CTGACTAACG CACTGGATGA CGACTCGGTG
ATTGCGCGTT TAAGTAAGAC GACCAGCGTG CAGGAAGTAT TGGACTTACT GGGCGGTAAA
ACGTCTGCTT GA
 
Protein sequence
MFSPDAKVRV QNFGRFLSNM VMPNIGAFIA WGIITALFIP TGWLPNETLA KLVGPMITYL 
LPLLIGFTGG RLVGGDRGGV VGAITTMGVI VGADMPMFLG AMIVGPLGGW AIKHFDRWVE
GKIKSGFEML VNNFSSGIIG MLLALLAFMA IGPLVEVLSK GLAYGVDVMV QNNLLPLASI
FVEPAKILFL NNAINHGIFS PLGVQQAAET GKSIFFLIEA NPGPGLGVLM AYMFFGKGNA
KQSAGGAAII HFFGGIHEIY FPYVLMNPRL LLAVILGGMT GVFTLTLLNG GLVSAASPGS
ILAILAMTPK GAYFANIAAV ATAFAVSFVV SAILLKSSKA KDDEEGLEGA TRRMQDMKAQ
SKGVQAANAA AAAGDLSTVR KIIVACDAGM GSSAMGAGVL RKKVQDAGLK HIAVTNCAIN
NLPEDVDLVI THRDLTERAM RHAPQAQHIS LTNFLDSQLY NSLTAELLQA SQLVDNTKVQ
KVIEKLDDSF EAFEDNLFKL GAENIFLNQH ATAKEQAIRF AGEQLVKGGY VEPEYVEAML
DREKLSSTYL GESIAVPHGT IEAKDRVLKT GVVFCQYPEG VRFGDEEDDI ARLVIGIAAR
NNEHIQVITS LTNALDDDSV IARLSKTTSV QEVLDLLGGK TSA