Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4111 |
Symbol | |
ID | 5385553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 4639533 |
End bp | 4640351 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640867141 |
Product | hypothetical protein |
Protein accession | YP_001403055 |
Protein GI | 153948390 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATATTG GTTTGAGCTT GCAGGAAAGA AATAATAAAT ATTTTTATGC AATGGCAAAA ATAGAGGCTG ATAACTTAAT CAATCTCTCA AGAAGAGTTT CGTTTAATAA TATAAAAGAT GTTTTCTTGA GAGTGAAATT TGAGAATGAT ATCAAAGAGT TTACACAAAA AAATCTTACC TTTATACGGA ACGCCAGAAC AGACAACGAT TGCAAGGAAG GGATAGACAA CTTGAAAATG GAATGCTATC ACCTTTCCAA GCAAGACAGT ATGCTTTCAT TAAAACAGGC GAAGGTATAC ATATCCGCTA AAATTGAAGA GCATGATAAA GTTATCGGCT ATGTTATTGA TGGAATAGCT GTAATTGTTG GCGGTTTACA GATGGTCGCC GGAGGTGGAA TTCTCCTTGG CTCAATAGCT TCAGGAAATA TTGTCGGTAT CATCGTTGGT GCTCATTTGA TATTAAATGG TGCAAGTAGT CTATCAGAAG GGGTTCAGCG GTTAAGAGGC AATAAAAATG CTACCGGTTT TATGCAGGAT GCTTATATGG GAACGGCTGA ATTCTTTGGA TTTGAAAGAA AAACCGGTAT GTTGGCCTAT TATGCGGCAG ATTTAACTAC GTCATTCTAT GGTGTCATTA AATTGTCATT AAAACCCGAT GCGTGGAGAT TGTATAAATA TATTCCATCC GATTACTACC GAAAAATAAA CAGCATGAGT AAGCTAGCAC TTACCATACA AGGTGTTAAG GCTACAAATA AAATAAGAGT TATCGGTAGC ACCTATCTGG ATGATAATTC AGAGTATGAA AGAAAATAG
|
Protein sequence | MDIGLSLQER NNKYFYAMAK IEADNLINLS RRVSFNNIKD VFLRVKFEND IKEFTQKNLT FIRNARTDND CKEGIDNLKM ECYHLSKQDS MLSLKQAKVY ISAKIEEHDK VIGYVIDGIA VIVGGLQMVA GGGILLGSIA SGNIVGIIVG AHLILNGASS LSEGVQRLRG NKNATGFMQD AYMGTAEFFG FERKTGMLAY YAADLTTSFY GVIKLSLKPD AWRLYKYIPS DYYRKINSMS KLALTIQGVK ATNKIRVIGS TYLDDNSEYE RK
|
| |