| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4094 |
|---|
| Symbol | |
|---|
| ID | 5384875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 4619260 |
|---|
| End bp | 4620030 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640867124 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001403039 |
|---|
| Protein GI | 153947158 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3943] Virulence protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACG AAAACTTACC TCAGGCCCCT ACCGGTGAAT TTGTGATGTT TTCCACTGAG
GATGGCCAAC TTCGTATTGA ATGCCGTTTT GAAAGTGAAA CTCTTTGGCT CCCTCAGGCA
GCAATAGCAA ATCTCTATCA AGTTACGCCT CAGGCGATCA CGCAGCATAT TAAGGCTATC
TACGAAGACG GCGAACTTGA GCAAAGTGCA ACCTGTAAGC CTTTCTTACA AGTTCGTCAG
GAAGGGACTC GGCAAGTAAA TCGCAACACG ATGCATTACA GCTTATCAGT AATACTTGCT
GTGGGTTATC GGGTTCGTTC GGTTCGTGAG ACTCAGTTCC TCCAGTGGGC TACACAAACT
TTGCAGGAAT ATCTGATTAA AGGTTTTGTG ATGGATGATG AGCGGCTGAA AAATCCGCCT
GTTGGCCAGT CTGTAGTGCC GGATTACTTT GGCGAGATGT TGGAACGTAT TCGCGATATC
CGTGCTAGTG AGCGACGGGT TTATCTGCGG GTTCGAGAGA TCTTTGCTTT AGCCGCCGAC
TATGAGCCTT CATTACAAGA GACGACCCGT TTTTTCCACG TTATTCAGAA CAAATTACAC
TTTGCCTGTA CCGGGCAAAC AGCCGCAGAG CTTATCCACC AACGAGCTGA TGCCAACTTA
CCGAATATGG GGCTGACCAG TTTTAAAGGT AATGCAGTCC GTAAAAGTGA TGTAATCATT
GCGAAGAACT ATTTAAGTCA AAGTGAAGTT GATGACAGGC AAACACCTTA G
|
|---|
| Protein sequence | MTDENLPQAP TGEFVMFSTE DGQLRIECRF ESETLWLPQA AIANLYQVTP QAITQHIKAI
YEDGELEQSA TCKPFLQVRQ EGTRQVNRNT MHYSLSVILA VGYRVRSVRE TQFLQWATQT
LQEYLIKGFV MDDERLKNPP VGQSVVPDYF GEMLERIRDI RASERRVYLR VREIFALAAD
YEPSLQETTR FFHVIQNKLH FACTGQTAAE LIHQRADANL PNMGLTSFKG NAVRKSDVII
AKNYLSQSEV DDRQTP
|
|---|
| |