Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4084 |
Symbol | |
ID | 5386874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4605619 |
End bp | 4607022 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640867113 |
Product | amino acid permease family protein |
Protein accession | YP_001403028 |
Protein GI | 153948612 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAATG ATTCATCCAC GCTCAAACGC GGCCTTAGTG CACGACATAT CCGGTTTATG GCATTAGGTT CTGCCATTGG TACTGGCCTA TTTTATGGTT CGGCTGAGGC AATCCGTCTG GCGGGGCCTG CAGTGTTATT AGCTTATTTG ATTGGCGGTG CGGCAGTCTT TATGGTGATG CGAGCCTTGG GCGAAATGGC CGTACATGAC CCCGTGGCCG GCTCTTTTGG TCACTATGCC AGCCGTTATC TGGGGCCATT GGCGGGGTTC CTGACGGGCT GGACCTATAC CTTTGAAATG GTTGTTGTGG CACTGGCTGA TGTTACCGCT TTTGGTATTT ATATGGGGCT GTGGTTTCCT GATGCGCCCC AATGGGTATG GGTGCTAAGT ATCATTTTCT TTATCGGTGC GCTGAATCTA TGTTCAGTGA AAGTCTTTGG TGAAATGGAG TTCTGGCTCT CGTTGCTAAA AGTGGCTGCC ATTATCGCCA TGATTGCCGC AGGTTTGGGC ATTATGATGT TTGGTTTCGG GGCGGGGCAT GACAGCACAG GCGTCAGTAA TTTATGGGCT CATCAAGGGT TTATGCCAAA TGGGATCACG GGGGTGATTG CATCATTTGC TGTAGTGATG TTTGCTTTTG GGGGAATTGA AATTATTGGG GTGACGGCCA GTGAAGCGAA GGATCCGGGA AAGGTATTAC CACGAGCCAT CAATACAGTG CCAATACGTA TTCTATTGTT CTATGTTTTG ACCCTGTTTG TCCTGATGGC TATCTATCCG TGGAATAGTA TTGGGCAAAA TGGCAGCCCC TTTGTGGAGA TTTTTAGTAG TTTAGGCATA AACTCTGCCG CTAATATTCT TAATTTGGTG GTAATAACCG CTGCAATTTC AGCGATTAAC AGTGATATTT ACGGTGCTGG CCGTATGATG TACGGCCTCG CGCAGGAAGG ATTGGCCCCT AAGAGCTTCA GTCGATTGAC ACGTAATGGC GTGCCCTATA TGACTATCTT GGTGATGGCG ATTACGCTGC TGTGCGGTGT GGTATTGAAT TACCTTATCC CGAAAAACGT GTTCTTGGTT ATTGCATCGA TCGCCACTTT TGCAACCGTC TGGGTGTGGC TAATGATTCT GGTATCACAA GTGGCTATGC GCCGCTCAAT GAGCAAAGCG CAAGTCGCTC GGCTGGCATT CCCCGTGCCA TTTTGGCCGC TAGCGCCTAT CCTTACCATT CTCTTTATGG CCTTTATTAT TGCTGTTTTA GGTTACTTCC CTGCGACTCG TATTGCGATG TATGTCGGCC TGGCGTGGGT GGCATTAATG ACACTGGCGT GGTGGATTTG GTTACGTAAA GCCCCTTCAT GCGTTATTCA AGAGCGGGCG AAAAGCAGTG AGATGCCATC GTAA
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Protein sequence | MKNDSSTLKR GLSARHIRFM ALGSAIGTGL FYGSAEAIRL AGPAVLLAYL IGGAAVFMVM RALGEMAVHD PVAGSFGHYA SRYLGPLAGF LTGWTYTFEM VVVALADVTA FGIYMGLWFP DAPQWVWVLS IIFFIGALNL CSVKVFGEME FWLSLLKVAA IIAMIAAGLG IMMFGFGAGH DSTGVSNLWA HQGFMPNGIT GVIASFAVVM FAFGGIEIIG VTASEAKDPG KVLPRAINTV PIRILLFYVL TLFVLMAIYP WNSIGQNGSP FVEIFSSLGI NSAANILNLV VITAAISAIN SDIYGAGRMM YGLAQEGLAP KSFSRLTRNG VPYMTILVMA ITLLCGVVLN YLIPKNVFLV IASIATFATV WVWLMILVSQ VAMRRSMSKA QVARLAFPVP FWPLAPILTI LFMAFIIAVL GYFPATRIAM YVGLAWVALM TLAWWIWLRK APSCVIQERA KSSEMPS
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