Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4077 |
Symbol | |
ID | 5388026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4595913 |
End bp | 4597304 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640867105 |
Product | putative hemagglutinin/hemolysin |
Protein accession | YP_001403021 |
Protein GI | 153949762 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01731] adhesin HecA family 20-residue repeat (two copies) [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTGA CATATATTAA AACGAAACAG GGATTGTCTA TATTGCCTCT CTCTATCATA TTGTCGCTCT ATGGGAGTTC GGTTGCTTAT GCTGATAATA TTATTGCTGA TGTACAGGCT CCAATTGGAC AGCAAGCGGA AGTCTCTATT ATAAAAACGC CGCCCAGTGT ATGCCGAGCG CTTACCTCTT ACTGTGTCGG TATGACAGAG ACCGTCGTTA ATATTCAAGC ACCTGATGAA AATGGTTTAT CACATAACAA GTATTCTAAA TTTGATGTGG TCGCTAATGG CTTATTCGAT GTCACGACAC TGAATAATCG TTTAGCACAA GAGGTTGATG GTAACTCTTT TTTACAAGAC AAGTTAGCAA CCATTATATT AAATGAAGTC AATTCATCAC AGGCTAGTCT ATTAGATGGG AATCTCCATG TTGGTGGGCA AGATGCGCAT GTCATTATTG CTAATCCAGC GGGTATTAAT TGTCGAGGGT GCTCCTTTAC CAATACCTCT CATGTGACAT TGACTACCGG GGCACCATCG TTTAGTAACA ATAAGCTAAA TAATTTCATT GTTGAGCAGG GTAATATTAA TATTGAAAAA GATCCCTCTT ACTATATGAA AAGTGGCTTG CGAAATAAAA GTATGGATAC GACTTACCTT GATTTATTTG CGGAAAAAAT CACTGTCAAT GGTGATATCA ATGCGGACGA TGTTTATATT GTCACGGGAA AAAATAAAGT AGGTTTCTCT TTGCCTGGGC AACCATTGCA CGTGTCGCGT TTAGACAATG AAAATACACC AGTACCAGAT ACAGTTAGTT TGGATGTCAG TGAAATTGGG GGAATGTACG CCAATAAAAT TCGTATCTAT ACAACCGATA GCACGATTAA AAATAAGGGG GCAATACGCG CCAACGATAC ACTAAGCCTC AGTTCTGCAG CCAATATAGA TAACAGTAAT GGGAATATAT CAGGTAAAAT GGTGTTACTG AGCAGCGAGG GTGTTATAAA TAACTCTGGT GGCACAATAT TAAATAATGG TGAGTATGAT TTATTACCTT CTCAAGGTAT TAAAATAACA TCTCGTGGGT TAAATAATGA AGGTGGAAAA ATAGAGTATA AAAATGGTAG CGTTGAAATA GCAACAGTTA ACACCATCAA AAATGGTAAA GGTACAATTA AAGCAACATC AACGCAAGGG CGGGTAAAAA TGAACCTTCA CAGTAATCAT CTTAATAATA CTGGAGGGAG TGTCATTTCT TCAGGAAAAG TAGAGGGTAA AGTTAATAAT ATACGAAACA ATAGAGGGTC CATTATAGGT TTAGGGGGAG TGGATTTGAA TGAAACTGTT TTAATTAATA GTACCGGTAA AATAATTTCT GGTTTTAATT GA
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Protein sequence | MKLTYIKTKQ GLSILPLSII LSLYGSSVAY ADNIIADVQA PIGQQAEVSI IKTPPSVCRA LTSYCVGMTE TVVNIQAPDE NGLSHNKYSK FDVVANGLFD VTTLNNRLAQ EVDGNSFLQD KLATIILNEV NSSQASLLDG NLHVGGQDAH VIIANPAGIN CRGCSFTNTS HVTLTTGAPS FSNNKLNNFI VEQGNINIEK DPSYYMKSGL RNKSMDTTYL DLFAEKITVN GDINADDVYI VTGKNKVGFS LPGQPLHVSR LDNENTPVPD TVSLDVSEIG GMYANKIRIY TTDSTIKNKG AIRANDTLSL SSAANIDNSN GNISGKMVLL SSEGVINNSG GTILNNGEYD LLPSQGIKIT SRGLNNEGGK IEYKNGSVEI ATVNTIKNGK GTIKATSTQG RVKMNLHSNH LNNTGGSVIS SGKVEGKVNN IRNNRGSIIG LGGVDLNETV LINSTGKIIS GFN
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