Gene YpsIP31758_4013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_4013 
Symbolasd 
ID5388161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp4521208 
End bp4522311 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content51% 
IMG OID640867042 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001402959 
Protein GI153949606 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACG TTGGTTTTAT CGGCTGGCGC GGTATGGTCG GCTCAGTGCT CATGCAACGC 
ATGATTGAAG AACGCGACTT TGACGGTATC CGCCCAGTCT TTTTCTCTAC CTCTCAACAT 
GGTCAGGCTG CACCGGCTTT CGCGGGCCAC CAAGGTACGT TACAAGATGC TTATGATATT 
GATGCATTGA GTGCATTGGA TATCATCATC ACCTGCCAAG GGGGCGACTA TACCAACCAA 
ATTTATCCGA AGCTGCGTGA AATCGGTTGG CAAGGCTATT GGATTGACGC CGCTTCTTCG 
CTGCGTATGC AAGATGACAC CATTATTATT CTGGATCCGG TTAACCACGA TGTGATTAAG 
CAGGGGCTGG ATAAGGGGAT CAAAACCTTT GCAGGCGGTA ACTGTACCGT TAGCCTGATG 
CTAATGTCAT TGGGCGGTTT GTTTGCCAAT AATCTGGTGG AGTGGGCATC GGTTGCCACT 
TATCAGGCCG CATCTGGCGG CGGCGCTCGT CATATGCGTG AATTACTGAC CCAAATGGGT 
ATGCTACATG CTGGTGTGGC AAAAGAGTTG CAAGACCCGG CATCTGCCAT TTTGGATATT 
GAACGCAAAG TGACGTCAAC AACTCGCAGT GGCACGTTAC CGACCGATAA TTTTGGTGTG 
CCGCTAGCAG GTAGCCTCAT CCCGTGGATC GACAAAGCGT TGGATAATGG TCAGAGCCGT 
GAAGAGTGGA AAGGCCAGGC CGAGACCAAT AAAATTCTGA GTACCAGTAC TCTGATTCCT 
GTTGATGGCC TATGTGTGCG TGTTGGTGCG CTGCGTTGTC ATAGCCAAGC CTTTACTCTG 
AAACTGAAAA AAGACGTTCC ATTAGCCGAA ATCGAGCAAA TGCTGGCGAC GCACAATGAC 
TGGGTACGGG TTATTCCGAA TGATCGTGAA TTGAGTATGC GTGAACTGAC ACCTGCTGCG 
GTCACCGGCA CATTGAATAC CCCAGTTGGC CGCTTGCGCA AGCTGAATAT GGGGCCAGAA 
TATTTGTCCG CCTTTACCGT TGGTGATCAA CTGTTATGGG GGGCTGCTGA GCCACTGCGC 
CGTATGCTGC GAATTCTGCT GTAG
 
Protein sequence
MKNVGFIGWR GMVGSVLMQR MIEERDFDGI RPVFFSTSQH GQAAPAFAGH QGTLQDAYDI 
DALSALDIII TCQGGDYTNQ IYPKLREIGW QGYWIDAASS LRMQDDTIII LDPVNHDVIK 
QGLDKGIKTF AGGNCTVSLM LMSLGGLFAN NLVEWASVAT YQAASGGGAR HMRELLTQMG 
MLHAGVAKEL QDPASAILDI ERKVTSTTRS GTLPTDNFGV PLAGSLIPWI DKALDNGQSR 
EEWKGQAETN KILSTSTLIP VDGLCVRVGA LRCHSQAFTL KLKKDVPLAE IEQMLATHND 
WVRVIPNDRE LSMRELTPAA VTGTLNTPVG RLRKLNMGPE YLSAFTVGDQ LLWGAAEPLR 
RMLRILL