| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4006 |
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| Symbol | glgB |
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| ID | 5385946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4497954 |
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| End bp | 4500137 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640867036 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_001402953 |
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| Protein GI | 153947987 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGTAC TTCCCGATCG TCAGGTGATT AATCAGCTTA TTTCCGGCCA TTATGGCGAT
CCCTTCTCCA TTTTGGGTAT GCATGAAACC TCGCAGGGGT TGCAGGTTTG TGCATTGCTG
CCAGATGCCC AAGAAGTCTG GCTAGTGGAG ACAGAGAACG GGCGGCGGAT AGCACAATTA
ACGCTCGAAG ATCCCCGTGG TTTTTTTATT GCACAACTGA CTCGTCGTAA GAAATCCTTC
CGCTACCAAT TTGCCGTTAC CTGGCAAGAA AACCCACAAA TCATCGACGA TCCTTACCGG
TTCGGTCCCT TATTACAGGA TATTGATAGC TGGTTATTGG CTGAAGGTAC CCATTTACGC
CCTTATGAAC GCTTGGGGGC ACATTTAATG CGCCTTGATG GTGTACCCGG TGTCAGTTTT
GCGGTTTGGG CACCGAATGC TCAGCGGGTC TCCGTGGTGG GGGATTTTAA CTTTTGGGAT
GGCCGCCGTC ATCCGATGCG CTTACGGCGT GAAAATGGCA TTTGGGAGCT ATTTCTGCCA
GGAATAGAGG CGGGGCAGTT GTATAAGTTT GAGATCATTG ATTGCCATGG CCAGGTGCGT
CTGAAAGCTG ACCCTTACGC TTTTGAAGCG CAGATGCGGC CAGAAACCGC CTCATTGATT
AGCCCGCTAC CCGATGTAGT GAAGAGTAGC GCCGCACGGC AAAAAGCCAA TGATTTATGT
TCCCCGGTGT CTATCTATGA AGTGCATCTC GGTTCGTGGC GTCGGCATAC CGATAATAAT
TTCTGGTTGA GTTACCGCGA ATTGGCGGAT CAACTGGTCG AATACGTTAA ATATATGGGT
TTTACCCATG TCGAGCTGCT GCCGATTAAC GAACATCCAT TTGACGGTAG CTGGGGTTAT
CAGCCGCTAG GATTATATGC ACCGACCCGC CGTTACGGCA CCCCAGAGGA TTTCAAAGCG
TTCGTCGCCA AATTCCATCA GGCAGGAATT AACGTGATCC TTGATTGGGT TCCCGGCCAT
TTTCCCAGTG ATGAGCATGG ATTATCGACC TTCGATGGCA CTGCGTTGTA TGAATATGCT
GATCCGCGCG AAGGGTACCA TCAGGATTGG AATACCCTGA TCTATAACTA TGGTCGTAAC
GAAGTCCGTA ACTATCTGGC GGGCAATGCA TTCTACTGGA TGGAACGTTT TGGCATCGAT
GCGTTGCGTA TTGATGCGGT GGCCTCAATG ATTTACCGCG ATTATAGCCG TGCTGAAGGG
CAGTGGGTGC CTAACTATTA TGGTGGCCGG GAAAATTTGG AGGCTATCGC TTTCTTGCGT
TACACCAATA AGACCATTGG CGTTGAACGC CCCGGCAGTG TGACCATGGC GGAGGAGTCA
ACCGACTTTC CTGGTGTGAC ATTACCGCCT GATATTGGTG GCCTGGGTTT CAACTATAAA
TGGAACATGG GTTGGATGCA TGACACGCTG AATTACATGC AATGTGATCC TGTTCACCGC
AAATACCACC ATAATTTGAT GACGTTCGGT ATGTTATACG CTTATACCGA GAACTTTATC
TTACCGCTCT CCCACGATGA AGTGGTCCAC GGCAAGCGCT CGATACTTGA TCGTATGCCG
GGTGATGCCT GGCAGAAATT TGCCAACCTA CGGGCTTATT ACGCATTTAT GTGGGCGCAT
CCCGGTAAAA AACTGCTGTT TATGGGCTGT GAATTTGCGC AGGGGCGTGA GTGGAATTTC
GAAACCAGTC TGGATTGGCA CCTGCTGGAC GATGAAAACG GCTGGCATTC CGGTGTGCAG
CGTCTGGTTC GTGACCTTAA CCATTGCTAT CGCCAGTATG CGCCGTTGTA TGAATGGGAT
TATCAACCCG CTGGTTTTGA ATGGTTGGTG GTTGATGACC ACGAAAATTC GGTATTCGCC
TTCCTGCGCC GTGATGCCGA GGGGCACGAA CTGATTGCTA TCAGTAATTT CACCCCGGTT
CCACGTTATC ACTACCGTGT GGGCATTCCA CAAGGTGGTC ACTACCGTGA AGTGTTGAAT
TCTGACTCTG CATTTTACTG CGGCAGTAAC CTGGGTAATC AGGGCGGCAT TGATAGCCAT
CATGTGAGGA GCCACAACCA CGAGCATTCG TTGTTACTCA CCTTGCCACC GCTGGCAACG
ATTTACCTGC TGCGGGAGAA CTAG
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| Protein sequence | MPVLPDRQVI NQLISGHYGD PFSILGMHET SQGLQVCALL PDAQEVWLVE TENGRRIAQL
TLEDPRGFFI AQLTRRKKSF RYQFAVTWQE NPQIIDDPYR FGPLLQDIDS WLLAEGTHLR
PYERLGAHLM RLDGVPGVSF AVWAPNAQRV SVVGDFNFWD GRRHPMRLRR ENGIWELFLP
GIEAGQLYKF EIIDCHGQVR LKADPYAFEA QMRPETASLI SPLPDVVKSS AARQKANDLC
SPVSIYEVHL GSWRRHTDNN FWLSYRELAD QLVEYVKYMG FTHVELLPIN EHPFDGSWGY
QPLGLYAPTR RYGTPEDFKA FVAKFHQAGI NVILDWVPGH FPSDEHGLST FDGTALYEYA
DPREGYHQDW NTLIYNYGRN EVRNYLAGNA FYWMERFGID ALRIDAVASM IYRDYSRAEG
QWVPNYYGGR ENLEAIAFLR YTNKTIGVER PGSVTMAEES TDFPGVTLPP DIGGLGFNYK
WNMGWMHDTL NYMQCDPVHR KYHHNLMTFG MLYAYTENFI LPLSHDEVVH GKRSILDRMP
GDAWQKFANL RAYYAFMWAH PGKKLLFMGC EFAQGREWNF ETSLDWHLLD DENGWHSGVQ
RLVRDLNHCY RQYAPLYEWD YQPAGFEWLV VDDHENSVFA FLRRDAEGHE LIAISNFTPV
PRYHYRVGIP QGGHYREVLN SDSAFYCGSN LGNQGGIDSH HVRSHNHEHS LLLTLPPLAT
IYLLREN
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