Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3978 |
Symbol | pckA |
ID | 5386776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 4462056 |
End bp | 4463675 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640867009 |
Product | phosphoenolpyruvate carboxykinase |
Protein accession | YP_001402926 |
Protein GI | 153948727 |
COG category | [C] Energy production and conversion |
COG ID | [COG1866] Phosphoenolpyruvate carboxykinase (ATP) |
TIGRFAM ID | [TIGR00224] phosphoenolpyruvate carboxykinase (ATP) |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGTTA AAGGAATTAC CCCGCAGGAG CTCGCCGCCT ATGGCATCCA TAACGTCAGC GAGATTGTTT ACAACCCAAG CTATGATTTA CTGTTTGAAG AAGAGACCAA ACCCACGTTG GAAGGATACG AGCGTGGCAC ACTGACGACT ACCGGCGCAA TAGCGGTAGA TACCGGTATT TTTACCGGGC GTTCACCCAA AGATAAATAT ATTGTCCGCG ATGCTATCAC TCAGGATACC GTGTGGTGGG CCGATCAGGG CAAAGGTAAA AATGATAATA AGCCTCTGAG CCAAGAGATC TGGAGCCATT TGAAAGGTCT GGTGACGGAA CAACTCTCTG GCAAACGCCT CTTTGTTGTC GATACATTCT GCGGTGCTAA TGCGGATACC CGCCTGCAAG TCCGCTTTAT CACGGAAGTC GCTTGGCAGG CACACTTCGT CAAAAATATG TTTATCCGTC CATCAGATGA AGAGCTGGCT CGGTTCGAGC CTGACTTTAT CGTGATGAAC GGTGCCAAAT GCACTAACCC ACAATGGAAA GAGCAGGGCC TGAACTCAGA AAACTTTGTC GCCTTTAATC TGACAGAACG TATGCAGTTG ATTGGTGGCA CGTGGTATGG CGGCGAAATG AAGAAAGGGA TGTTCTCAAT GATGAACTAC CTGCTGCCAC TGAAAGGCAT TGCTTCAATG CATTGTTCAG CTAACGTCGG CGAAAAAGGC GATGTTGCCA TCTTCTTCGG TCTTTCGGGT ACCGGTAAAA CCACTTTATC TACCGATCCA AAACGCAAGT TGATCGGTGA TGATGAACAT GGCTGGGATG ATGATGGCGT CTTTAACTTC GAGGGGGGGT GCTACGCTAA AACCATCAAG TTATCTGAAG AAGCAGAGCC AGATATTTAC CACGCCATTA AACGCGACGC CTTGCTGGAA AACGTGGTGG TGCTAGCAGA CGGCACCGTT GATTTTAATG ACGGTTCTAA AACCGAAAAC ACCCGCGTCT CTTATCCGAT TTACCACATT GATAACATCG TTAAACCGGT GTCTAAAGCA GGCCATGCGA CCAAGGTTAT CTTCTTGACT GCCGATGCTT TTGGGGTGCT CCCCCCAGTA TCTCGTCTGA CCGCAAACCA AACTCAATAT CACTTCCTAT CTGGCTTTAC TGCCAAACTG GCAGGGACAG AGCGTGGCGT CACGGAGCCA ACACCAACTT TCTCTGCTTG CTTTGGTGCG GCCTTCCTAT CGCTGCACCC AACGCAGTAC GCTGAAGTGC TGGTTAAGCG TATGCAAGCG GTTGGCGCAC AAGCCTATCT GGTCAATACC GGTTGGAATG GGACAGGTAA GCGTATTTCC ATCAAGGATA CCCGCGCCAT TATTGACGCA ATCCTAAACG GGGAGATTGA TAAGGCAGAA ACCTTTACAC TGCCAATCTT TGATCTGGCA GTCCCTATGT CGTTACCCGG TGTGAATCCC GATATCCTCG ATCCTCGCGA CACCTACGCC GATAAAGCAC AATGGCAAGA GAAAGCTGAA GATTTGGCGA AGCGCTTTGC GACTAACTTT GATAAATACA CTGATACCCC TGCGGGGGCC GCGTTGGTTA GCGCGGGGCC AAAGATCTAA
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Protein sequence | MSVKGITPQE LAAYGIHNVS EIVYNPSYDL LFEEETKPTL EGYERGTLTT TGAIAVDTGI FTGRSPKDKY IVRDAITQDT VWWADQGKGK NDNKPLSQEI WSHLKGLVTE QLSGKRLFVV DTFCGANADT RLQVRFITEV AWQAHFVKNM FIRPSDEELA RFEPDFIVMN GAKCTNPQWK EQGLNSENFV AFNLTERMQL IGGTWYGGEM KKGMFSMMNY LLPLKGIASM HCSANVGEKG DVAIFFGLSG TGKTTLSTDP KRKLIGDDEH GWDDDGVFNF EGGCYAKTIK LSEEAEPDIY HAIKRDALLE NVVVLADGTV DFNDGSKTEN TRVSYPIYHI DNIVKPVSKA GHATKVIFLT ADAFGVLPPV SRLTANQTQY HFLSGFTAKL AGTERGVTEP TPTFSACFGA AFLSLHPTQY AEVLVKRMQA VGAQAYLVNT GWNGTGKRIS IKDTRAIIDA ILNGEIDKAE TFTLPIFDLA VPMSLPGVNP DILDPRDTYA DKAQWQEKAE DLAKRFATNF DKYTDTPAGA ALVSAGPKI
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