Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3955 |
Symbol | codA |
ID | 5388486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4435470 |
End bp | 4436780 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640866986 |
Product | cytosine deaminase |
Protein accession | YP_001402903 |
Protein GI | 153948211 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGGCAT TGATGGCAGG GCAATCTGTA CCGAATTATT CATTAACGAC GGTAAATAAT GTGCGTCGTA TAGGGTTAGC GGGGCTGTGG CAGATAACGA TAGCGGAAGG CAAAATCAGC CTGATTCAGC CTCAGCCGGA GCAATCCCTA ACAGGGCAAG GTGTGCTGGA TGCGCAGGGC GGTTTGGCGC TCCCGCCATT TATTGAGCCG CATATTCATC TGGATACGAC TCAAACCGCT GGGCAACCGA GTTGGAATCA GTCGGGAACT CTGTTTGAGG GAATTGAACG TTGGGCGGAG CGCAAAGCGC GACTAACGCG CGAGGATGTG AAGCAGCGGG CCTGGCAAAC ATTGAAATGG CAGATAGCCA ACGGTATCCA GCATGTCCGA ACGCATGTTG ATGTTTCCGA TCCACACTTG ACGGCATTGA GCGCCATGTT GGAGGTGAAA GAAGAGGTTA GCCCTTGGGT TGATATGCAG ATTGTGGCTT TCCCACAAGA GGGCATCCTC TCTTATCCTG ATGGTGCGGC GTTATTGGAA GAGGCACTGC GCTTGGGTGC GGATGCGGTG GGGGCGATCC CCCATTTTGA ATTTACCCGC GAATATGGCG TGGAATCTTT GCATATCGCG TTTGCATTGG CGCAAAAATA TCAGCGGCTG GTGGATGTTC ATTGCGATGA AACGGATGAT GAGCAATCGC GCTTTATCGA AACCGTGGCG GCGCTGGCCC TTCGCGAAAA TATGGGCGCA CGGGTAACCG CCAGCCATAC CACGGCGATG CACTCTTATA ATGGTGCCTA TACATCACGG CTGTTCCGCT TGCTGAAATT ATCGGGCATT AATTTTGTCG CCAACCCGCT GGTGAATATT CATCTGCAAG GCCGTTTTGA TACTTATCCG AAGCGGCGTG GTATCACGCG GGTCAAAGAG ATGTTGGCTG CCGAGATTAA TGTGTGCTTC GGCCATGACG ATGTGTTCGA CCCGTGGTAT CCGCTAGGTA CCGCCAATAT GTTGCAGGTG CTGCATATGG GATTACATAT TTGTCAGTTG ATGGGATATG AACAAATTAA TGATGGTCTG AATCTGATAA CCACCCACAG TGCCAAGACG CTGAATTTAG CAGATTATGG TTTGCAGCCT GGTAACCGCG CCAACCTGAT TATTCTACCC GCAGAAAATG GTTTTGATGC TCTACGGCGG CAGGTTCCCG TCAGTTACTC TATTCGTCAT GGTGTGGTGA TCGCGAAGAC GCAACCCGCA GAGAGCCGGA TATATCTGGG GCAGGAAGAG ATCGTGGATT TTCGGCGTTA A
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Protein sequence | MEALMAGQSV PNYSLTTVNN VRRIGLAGLW QITIAEGKIS LIQPQPEQSL TGQGVLDAQG GLALPPFIEP HIHLDTTQTA GQPSWNQSGT LFEGIERWAE RKARLTREDV KQRAWQTLKW QIANGIQHVR THVDVSDPHL TALSAMLEVK EEVSPWVDMQ IVAFPQEGIL SYPDGAALLE EALRLGADAV GAIPHFEFTR EYGVESLHIA FALAQKYQRL VDVHCDETDD EQSRFIETVA ALALRENMGA RVTASHTTAM HSYNGAYTSR LFRLLKLSGI NFVANPLVNI HLQGRFDTYP KRRGITRVKE MLAAEINVCF GHDDVFDPWY PLGTANMLQV LHMGLHICQL MGYEQINDGL NLITTHSAKT LNLADYGLQP GNRANLIILP AENGFDALRR QVPVSYSIRH GVVIAKTQPA ESRIYLGQEE IVDFRR
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