Gene YpsIP31758_3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3916 
SymbolrpsJ 
ID5388371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4395518 
End bp4395829 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content53% 
IMG OID640866947 
Productribosomal protein S10 
Protein accessionYP_001402864 
Protein GI153949097 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.06232e-19 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAACC AAAGAATCCG TATCCGCCTG AAAGCGTTTG ATCATCGTTT GATCGATCAA 
TCAACTGCGG AAATCGTCGA GACTGCCAAG CGCACTGGTG CGCAGGTTCG TGGTCCGATC
CCGCTGCCAA CTCGCAAAGA GCGCTTTACC GTTCTGATTT CTCCGCACGT CAATAAAGAT
GCGCGCGATC AGTACGAAAT TCGCACTCAC AAGCGTCTGG TTGACATCGT TGAGCCAACC
GAGAAAACCG TTGATGCTCT GATGCGTCTG GATCTGGCTG CCGGTGTAGA CGTGCAGATC
AGCCTGGGTT AA
 
Protein sequence
MQNQRIRIRL KAFDHRLIDQ STAEIVETAK RTGAQVRGPI PLPTRKERFT VLISPHVNKD 
ARDQYEIRTH KRLVDIVEPT EKTVDALMRL DLAAGVDVQI SLG