Gene YpsIP31758_3914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3914 
SymbolrplD 
ID5386062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4394234 
End bp4394839 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content50% 
IMG OID640866945 
Product50S ribosomal protein L4 
Protein accessionYP_001402862 
Protein GI153948290 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.05295e-19 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTGG TAATGAAAGA CGCGCCAGGC GCGCTGACTG TTTCCGAAAC TACCTTCGGG 
CGTGATTTCA ATGAAGCGCT TGTACATCAG GTTGTTGTTG CTTACGCAGC AGGTGCCCGT
CAAGGTACTC GTGCTCAGAA GACCCGTGCT GAAGTAACAG GTTCCGGTAA AAAACCGTGG
CGTCAGAAAG GTACCGGCCG TGCGCGTGCA GGTTCTGTAA AGAGCCCGAT CTGGCGTTCA
GGTGGTGTGA CCTTTGCTGC AAAGCCTCAG GACCACAGTC AAAAAGTAAA TAAAAAGATG
TACCGCGGCG CGCTGAAAAG CATTCTGTCC GAATTGGTAC GTCAAGATCG TCTGATCATT
GTCGAAAAGT TCTCTGTTGA AGCACCTAAA ACTAAGTTGC TGGCGCAGAA ACTGAAAGAT
ATGGCTCTGG AAGATGTGCT GATCGTAACG GGTGAACTGG ACGAGAACTT GTTCTTGGCC
GCTCGCAACC TGTACAAGGT TGATGTTCGC GATGTAGCCG GTATTGATCC AGTTAGCCTG
ATCGCCTTCG ACAAAGTGGT TATGACTGCT GATGCTGTGA AGCAAGTTGA GGAGATGCTG
GCATGA
 
Protein sequence
MELVMKDAPG ALTVSETTFG RDFNEALVHQ VVVAYAAGAR QGTRAQKTRA EVTGSGKKPW 
RQKGTGRARA GSVKSPIWRS GGVTFAAKPQ DHSQKVNKKM YRGALKSILS ELVRQDRLII
VEKFSVEAPK TKLLAQKLKD MALEDVLIVT GELDENLFLA ARNLYKVDVR DVAGIDPVSL
IAFDKVVMTA DAVKQVEEML A