| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3900 |
|---|
| Symbol | rpsH |
|---|
| ID | 5387061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 4387983 |
|---|
| End bp | 4388375 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640866931 |
|---|
| Product | 30S ribosomal protein S8 |
|---|
| Protein accession | YP_001402848 |
|---|
| Protein GI | 153947108 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0096] Ribosomal protein S8 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000000000634775 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGC AAGATCCGAT CGCGGATATG CTGACCCGTA TCCGTAACGG TCAAGCCGCA
AACAAAGTTG CGGTCACCAT GCCCTCCTCC AAGCTGAAAG TGGCAATTGC CAACGTTCTG
AAGGAAGAAG GCTTTATTGA AGATTTTAAA ATCGAAGGCG ACACCAAGCC TGTTCTGGAA
TTAGCACTTA AGTACTTCCA GGGTAAGGCA GTGGTAGAAA GCATTCAACG TATCAGCCGT
CCAGGTCTGC GCATCTATAA GAAAAAAGAT GAGCTGCCAA AAGTTATGGC CGGTTTGGGT
ATCGCTGTTA TTTCTACCTC TAAAGGTGTT ATGACCGATC GTGCAGCTCG CCAAGCTGGT
CTTGGTGGCG AGATTATCTG CTACGTAGCT TAA
|
|---|
| Protein sequence | MSMQDPIADM LTRIRNGQAA NKVAVTMPSS KLKVAIANVL KEEGFIEDFK IEGDTKPVLE
LALKYFQGKA VVESIQRISR PGLRIYKKKD ELPKVMAGLG IAVISTSKGV MTDRAARQAG
LGGEIICYVA
|
|---|
| |