| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3898 |
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| Symbol | rplR |
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| ID | 5384407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4387072 |
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| End bp | 4387425 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640866929 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_001402846 |
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| Protein GI | 153947697 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000000000427886 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAAGA AAGCAGCTCG TATCCGTCGT GCGACCCGCG CACGCCGCAA GCTCAAAGAA
CTGGGTGCGA CTCGCCTGGT GGTACATCGT ACCCCACGCC ATATTTACGC GCAGGTTATC
GCACCAAACG GTTCTGAAAT TTTGGTAGCA GCTTCTACTG TAGAAAAAGC TATCAATGAG
CAATTGAAGT ACGCCGGCAA CAAAGATGCC GCAGCAGCTG TAGGCAAAAC TATTGCTGAG
CGCGCGTTGG AAAAAGGGAT CACGAAAGTA TCCTTTGACC GTTCCGGTTT CCAATATCAT
GGTCGAGTCC AGGCACTGGC AGATGCTGCC CGTGAAGCTG GCCTTCAGTT CTAA
|
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| Protein sequence | MDKKAARIRR ATRARRKLKE LGATRLVVHR TPRHIYAQVI APNGSEILVA ASTVEKAINE
QLKYAGNKDA AAAVGKTIAE RALEKGITKV SFDRSGFQYH GRVQALADAA REAGLQF
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