| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3878 |
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| Symbol | rimN |
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| ID | 5385060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4372463 |
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| End bp | 4373035 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640866909 |
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| Product | putative ribosome maturation factor |
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| Protein accession | YP_001402826 |
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| Protein GI | 153948235 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0000521724 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCAAC AAGAAAATAA TTTTGTGCTG GCGGATATAG TGCGGGCATT GCGGCAAGAA
GAGGTTATCG CTTATCCGAC AGAAGCAGTT TTTGGTTTAG GATGCGATCC CGATAGTGAA
AAAGCGGTTA ATACTTTGCT AGCGTTAAAA CAGCGGCCAT GGCAGAAAGG TTTGATCTTG
GTTGCCGCTA ATTATGCTCA GTTAGAGCCT TATATTAATG ATTCAATGCT TAATGAAATA
CAACGAGAAA CCCTCTTTTC CACTTGGCCG GGGCCGATAA CGTGGGTGAT ACCTGCCCGA
GTAGAAACAC CGCAATGGCT AACAGGCTGT TTTGACTCAT TGGCGGTGAG AGTAAGCAAT
CACCCACTTG TACAGCAGCT TTGTGCGGAA TATGGCAAGC CGTTAGTGTC AACTAGCGCT
AATTTAAGTG GGCATGAGCC GTGCCGCACG GAAGAAGAAG TCAGAATACA GTTTGGCCCT
TCATTACCGG TGTTATCCGG TCACGTTGGT GGCCGTTTGA ATCCATCTGA AATCAGAGAT
GCCTTAACGG GTAAGCGGTT TCGCCAAGGG TAG
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| Protein sequence | MNQQENNFVL ADIVRALRQE EVIAYPTEAV FGLGCDPDSE KAVNTLLALK QRPWQKGLIL
VAANYAQLEP YINDSMLNEI QRETLFSTWP GPITWVIPAR VETPQWLTGC FDSLAVRVSN
HPLVQQLCAE YGKPLVSTSA NLSGHEPCRT EEEVRIQFGP SLPVLSGHVG GRLNPSEIRD
ALTGKRFRQG
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