| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3871 |
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| Symbol | birA |
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| ID | 5384368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4362829 |
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| End bp | 4363788 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640866900 |
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| Product | biotin--protein ligase |
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| Protein accession | YP_001402822 |
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| Protein GI | 153948890 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
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| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.000364778 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGATA TCAGGGTCCC CTTACGGTTA GTCAGTATAT TATCTGATGG TTTTTTTCAC
TCCGGTGAGC AATTGGGTGA AACGTTAGGC ATGAGTCGCG CTGCGATTAA TAAACACATG
CAAACTATTA GAGATTGGGG TTTAGATGTT TTTACTGTCC CAGGTAAGGG CTACAGCTTA
CCTACTTCTA TCCAATTGCT TGATGAACAA AAAATATTAA GTTATTTACC TACGGGTCAC
GTAACAGTAT TACCCGTAGT CGATTCTACT AATCAATATT TATTGGATCG TATTACTGAA
TTGAAATCAG GTGATGCGTG TGTTGCGGAA TATCAGCAAG CAGGACGAGG TCGGCGTGGG
CGTCAATGGG TTTCTCCTTT TGGTGCTAAT CTTTATTTAT CAATGTATTG GCGGCTAGAG
CAAGGTCCTG CTGCTGCAAT GGGATTAAGC TTGGTTGTTG GGATTGTTAT GGCAGAGGTT
CTGCAGAATT TAGGTGCAGA GAAGGTTCGT GTTAAGTGGC CTAATGATCT GTATTTAAAT
GATAAAAAGC TGGCCGGAAT ATTAGTAGAG CTTACTGGGA AAACGGGTGA TGCTGCACAA
TTAGTCATTG GTGCAGGTAT TAACCTGACA ATGCGTGGTT CAGAAACAAA TGCTATTAAC
CAAGATTGGA TAAATTTGCA GGATGCTGGT GTTACTATCG ATCGTAATAA ACTCACTGCT
GAGATCTTAT CTGAATTACG GCTTGCAGTA GTTAAGTTCG AAAATGAGGG CTTATCGGCA
TTCCTTTCTC GTTGGCAGAA AATGGATAAT TATCTTAATA GGCCAGTGAA ATTAATTATT
GGTAATCAAG AGATTTTTGG TATTGCTCGC GGAATCGATC AGCAAGGCGC ATTATTATTA
GAACAAGATG GCAATATAAA GCCTTATATT GGCGGTGAGA TATCCCTTCG AGGTGTCTGA
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| Protein sequence | MKDIRVPLRL VSILSDGFFH SGEQLGETLG MSRAAINKHM QTIRDWGLDV FTVPGKGYSL
PTSIQLLDEQ KILSYLPTGH VTVLPVVDST NQYLLDRITE LKSGDACVAE YQQAGRGRRG
RQWVSPFGAN LYLSMYWRLE QGPAAAMGLS LVVGIVMAEV LQNLGAEKVR VKWPNDLYLN
DKKLAGILVE LTGKTGDAAQ LVIGAGINLT MRGSETNAIN QDWINLQDAG VTIDRNKLTA
EILSELRLAV VKFENEGLSA FLSRWQKMDN YLNRPVKLII GNQEIFGIAR GIDQQGALLL
EQDGNIKPYI GGEISLRGV
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