Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3848 |
Symbol | nfi |
ID | 5387519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4334421 |
End bp | 4335125 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640866873 |
Product | endonuclease V |
Protein accession | YP_001402799 |
Protein GI | 153950857 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTGATA CTAAAGCGCT ACAGGCAGAG CAGCGGCAAC GGGCATCGGA GATTAGTCTT CATGATGGCA TTGATAACCA GTTTGTGCGC TTTATTGCTG GAGCTGATGT CGGTTTTGAG CAGCATGGGG AGATAACCCG TGCCGCTATC GCTATTTTAC GCTATCCCTC TCTGGCGCTG GTGGAATACC AGGTTGCCAG AGTGGCAACT TCTCTGCCTT ATATCCCCGG TTTACTCTCT TTTCGTGAAT ATCCAGCGCT GTTAGCCGCG TGGGCGCAGT TGCAGCAACG CCCTGATCTG ATTCTGGTCG ATGGGCAAGG CATCGCTCAT CCTCGCCGTC TCGGCGTTGC CAGCCATTTT GGGTTATTGG TCGATGTACC GACGATTGGT GTCGCTAAAA GCCGCCTGTG TGGTGATTTC TTGCCACTGC ATCAAGATGT TGGTGCGGTG CAGCCCTTGT TCGATAACGA TGAGCAGCTT GGTTGGGTAT GGCGCAGTAA AATCCGCTGT AACCCACTGT TTATTTCGCC TGGGCATCGG GTGAGTGTTG GCAGTGCGCT GGCATGGGTT CAACGTTGCA TGGCGGGTTA TCGTCTGCCT GAACCAACCC GCTGGGCGGA TGCTATTGCT TCAAACCGTC CGCAATTTCA ACGTTGGCTG CGGAAAAATC CTGATTTTCT TGGCAAGCGT AGGGATATGA TTTAA
|
Protein sequence | MFDTKALQAE QRQRASEISL HDGIDNQFVR FIAGADVGFE QHGEITRAAI AILRYPSLAL VEYQVARVAT SLPYIPGLLS FREYPALLAA WAQLQQRPDL ILVDGQGIAH PRRLGVASHF GLLVDVPTIG VAKSRLCGDF LPLHQDVGAV QPLFDNDEQL GWVWRSKIRC NPLFISPGHR VSVGSALAWV QRCMAGYRLP EPTRWADAIA SNRPQFQRWL RKNPDFLGKR RDMI
|
| |