| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3761 |
|---|
| Symbol | uvrA |
|---|
| ID | 5385775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 4236507 |
|---|
| End bp | 4239350 |
|---|
| Gene Length | 2844 bp |
|---|
| Protein Length | 947 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640866785 |
|---|
| Product | excinuclease ABC subunit A |
|---|
| Protein accession | YP_001402715 |
|---|
| Protein GI | 153950806 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0178] Excinuclease ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.162646 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAATA TTGAAGTTCG GGGCGCTCGC ACCCACAATC TTAAGAATAT CAACCTGATT
ATCCCGCGCG ACAAACTGAT TGTTGTCACC GGCCTATCAG GTTCAGGCAA ATCCTCACTG
GCTTTTGATA CCTTGTATGC CGAAGGTCAA CGCCGTTATG TTGAGTCTCT CTCCGCCTAT
GCACGCCAAT TTCTGTCGCT GATGGAAAAA CCGGATGTTG ACCATATTGA AGGCCTGTCT
CCGGCTATCT CTATCGAGCA AAAATCAACC TCCCATAATC CACGGTCAAC TGTCGGTACT
ATCACTGAAA TCCATGATTA CCTGCGCTTG CTGTTCGCTC GAGTCGGCGA GCCGCGCTGC
CCTGATCATG ATGTCCCATT AGCGGCGCAA ACAGTCAGCC AAATGGTTGA TAACGTGATA
AGCCAGCCGG AAGGCCGCCG TCTGATGCTG CTGGCACCGG TGGTAAAAGA TCGCAAAGGT
GAACACACTA AAATACTGGA AAATCTGGCC GCTCAAGGTT ACATCCGGGC GCGGATCGAT
GGCGAGGTTT GTGATCTGTC TGATCCGCCC AAATTAGAGC TGCAAAAGAA ACACACCATT
GAAGTGGTGG TTGACCGTTT CAAGGTACGC GAAGATCTGG CGCAACGTTT GGCAGAATCA
TTTGAAACCG CACTGGCGTT ATCCGGCGGT ACCGCCGTGG TAGCCGATAT GGACGATCCG
CATGTGGAGG AGTTGTTATT TTCCGCTAAC TTTGCCTGCC CGATTTGCGG TTACAGCATG
AGAGAGTTGG AACCACGCCT GTTCTCCTTT AACAACCCGG CGGGTGCCTG CCCAACGTGT
GATGGCTTGG GTGTCCAGCA GTTTTTTGAT CCAGACCGCG TGCTGCAAAA CCCTGAGCTC
TCTTTAGCTG GCGGAGCGAT TCGCGGCTGG GATCGCCGTA ACTTCTATTA CTTCCAGATG
CTACGTTCAC TGGCCGAGCA TTATAAATTT GATATCGAAG CGCCGTTTAA CTCACTGGAC
AGCGCCGTCC AGCAAGCCGT GCTATACGGT TCAGGCAAAG ATACCATCGA GTTCAAGTAC
ATTAATGATC GCGGTGATAC TACCGTTCGC CGCCACCCTT TTGAGGGGGT GTTGCACAAT
ATGGAACGCC GTTATAAAGA GACGGAATCC AGTGCGGTGC GCGAAGAGTT AGCCAAATTT
ATCAGCAACC GCTCCTGTGC GTCATGCAGC GGTACCCGTC TGCGCAGAGA GGCTCGTTAT
GTCTTCGTGG AAAACACCAC CCTGCCAGAG ATTTCTGAAC TGAGCATCGG CCATGCACTG
AGTTTCTTCC AGAATATGAA GCTCAGTGGT CAGCGTGCAC AAATCGCTGA AAAGATACTG
AAAGAAATTG GCGATAGGCT GAAATTCCTG GTTAACGTCG GGCTGAATTA TCTGTCTTTA
TCCCGATCTG CCGAAACCCT GTCCGGTGGC GAAGCACAGC GTATCCGTCT GGCTAGCCAG
ATTGGCGCGG GTTTGGTCGG CGTTATGTAT GTGCTGGATG AGCCGTCTAT CGGTTTACAT
CAGCGCGATA ACGAACGCTT GCTGGAGACA TTGATTCACC TACGTAATCT GGGTAACACC
GTGATTGTGG TGGAACATGA TGAAGATGCC ATCCGGGCCG CAGATCATGT GATTGATATC
GGCCCTGGGG CCGGCGTGCA CGGAGGTGAA GTTGTCGCCG AAGGAACGGT AGATGACATC
ATGGCCGCAC CGGCGTCACT CACGGGCCAG TTCCTCAGCG GTAAGCGGAG CATCGCCATC
CCAGAGAAAC GGGTCAGTGC TGATCCGAGC AAAGTCTTAA AGCTGATAGG GGCTACGGGC
AATAACCTGA AAGATGTCAC TCTGACGCTG CCTGTCGGGC TATTCAGTTG CATCACCGGG
GTCTCCGGCT CGGGGAAATC GACGCTAATC AACGATACTT TATACAGTAT TGCCCAACGC
CAACTGAACG GCGCGACCAT CACCGAACCC GCACCATACC GCGAGATCCA AGGGCTAGAA
CATTTCGATA AAGTCATCGA CATTGATCAA AGCCCGATTG GCCGTACGCC GCGTTCTAAC
CCAGCCACCT ATACCGGCAT CTTTACCCCC ATTCGCGAGT TATTTGCCGG AGTGCCGGAA
TCACGCACCC GCGGTTATAC GCCAGGCCGT TTCAGTTTTA ACGTCAAAGG TGGGCGCTGC
GAAGCCTGCC AGGGCGATGG GGTAATTAAA GTAGAAATGC ACTTTCTGCC TGATATTTAT
GTTCCTTGCG ATCACTGTAA AGGTAAGCGT TATAACCGTG AAACGCTGGA AATAAAATAT
AAAGGTAAAA GTATTCACGA AGTTCTGGCG ATGACTATTG AAGAGGCCCG CGAGTTCTTT
GATGCCGTAC CTGCTCTGGC ACGTAAGCTG CAAACCCTAA TAGATGTTGG CCTGTCCTAT
ATTTGTCTGG GCCAATCAGC CACAACGTTA TCTGGTGGGG AAGCACAGCG GGTGAAACTA
TCGCGCGAAC TGTCAAAACG CGGGACCGGC CAGACATTGT ATATTCTGGA TGAGCCTACT
ACCGGCCTGC ATTTTGCCGA TATTCAGCAA CTGCTAGCGG TATTGCATCA GTTACGGGAT
CAGGGCAATA CCATTGTAGT GATTGAACAC AATCTGGACG TAATTAAGAC GGCGGATTGG
ATTGTCGATC TGGGGCCAGA AGGCGGCAGT GGTGGCGGTG AAATTTTGGT CTCCGGCACA
CCAGAGACGG TGGCGGAATG CGCGGTATCA CACACGGCAC GGTTCCTTAA GCCGATGTTG
CAGCGTAAGC CACAAACCGT TTAA
|
|---|
| Protein sequence | MDNIEVRGAR THNLKNINLI IPRDKLIVVT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY
ARQFLSLMEK PDVDHIEGLS PAISIEQKST SHNPRSTVGT ITEIHDYLRL LFARVGEPRC
PDHDVPLAAQ TVSQMVDNVI SQPEGRRLML LAPVVKDRKG EHTKILENLA AQGYIRARID
GEVCDLSDPP KLELQKKHTI EVVVDRFKVR EDLAQRLAES FETALALSGG TAVVADMDDP
HVEELLFSAN FACPICGYSM RELEPRLFSF NNPAGACPTC DGLGVQQFFD PDRVLQNPEL
SLAGGAIRGW DRRNFYYFQM LRSLAEHYKF DIEAPFNSLD SAVQQAVLYG SGKDTIEFKY
INDRGDTTVR RHPFEGVLHN MERRYKETES SAVREELAKF ISNRSCASCS GTRLRREARY
VFVENTTLPE ISELSIGHAL SFFQNMKLSG QRAQIAEKIL KEIGDRLKFL VNVGLNYLSL
SRSAETLSGG EAQRIRLASQ IGAGLVGVMY VLDEPSIGLH QRDNERLLET LIHLRNLGNT
VIVVEHDEDA IRAADHVIDI GPGAGVHGGE VVAEGTVDDI MAAPASLTGQ FLSGKRSIAI
PEKRVSADPS KVLKLIGATG NNLKDVTLTL PVGLFSCITG VSGSGKSTLI NDTLYSIAQR
QLNGATITEP APYREIQGLE HFDKVIDIDQ SPIGRTPRSN PATYTGIFTP IRELFAGVPE
SRTRGYTPGR FSFNVKGGRC EACQGDGVIK VEMHFLPDIY VPCDHCKGKR YNRETLEIKY
KGKSIHEVLA MTIEEAREFF DAVPALARKL QTLIDVGLSY ICLGQSATTL SGGEAQRVKL
SRELSKRGTG QTLYILDEPT TGLHFADIQQ LLAVLHQLRD QGNTIVVIEH NLDVIKTADW
IVDLGPEGGS GGGEILVSGT PETVAECAVS HTARFLKPML QRKPQTV
|
|---|
| |