Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3675 |
Symbol | groEL |
ID | 5387916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4142801 |
End bp | 4144447 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640866698 |
Product | chaperonin GroEL |
Protein accession | YP_001402629 |
Protein GI | 153950695 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCTA AAGACGTAAA ATTCGGTAAC GACGCTCGCA TTAAAATGCT ACGCGGCGTA AACATCCTTG CTGATGCAGT GAAAGTGACT CTGGGCCCTA AAGGCCGTAA CGTAGTTCTG GATAAGTCTT TCGGTTCTCC AACGATCACT AAAGACGGTG TTTCTGTTGC ACGTGAAATC GAACTGGAAG ACAAGTTCGA GAACATGGGC GCACAGATGG TTAAAGAAGT TGCCTCTAAA GCGAATGACG CTGCGGGTGA CGGTACCACG ACTGCAACAG TATTGGCTCA ATCCATCATC ACTGAAGGCC TGAAAGCAGT TGCCGCAGGC ATGAACCCAA TGGATCTGAA GCGCGGCATC GACAAAGCCG TTATCGCAGC GGTAGAAGAG CTGAAAAAAC TGTCTGTACC TTGCTCTGAT TCCAAAGCGA TTGCTCAGGT CGGTACCATC TCTGCAAACT CCGACTCAAC CGTTGGCGAA CTGATCGCTC AAGCGATGGA AAAAGTCGGT AAAGAAGGCG TTATCACCGT TGAAGAAGGT TCAGGCCTGC AAGACGAGTT GGACGTTGTA GAAGGTATGC AGTTCGATCG CGGCTACCTG TCTCCTTACT TCATCAATAA ACCAGAAACT GGCTCTATTG AACTTGAAAG CCCATTCATT CTGTTGGCTG ACAAGAAAAT CTCTAACATC CGTGAAATGC TGCCAGTTCT GGAAGCCGTA GCGAAAGCCG GCAAGCCACT GCTGATCATT GCAGAAGACG TTGAAGGCGA AGCCCTGGCG ACTCTGGTAG TGAACACCAT GCGCGGTATC GTTAAAGTTG CAGCGGTTAA AGCACCTGGC TTCGGCGACC GTCGTAAAGC GATGCTGCAA GACATCGCGA CCCTGACTGC GGGTACTGTT ATCTCTGAAG AGATCGGTCT GGAACTGGAA AAAACCACTC TGGAAGATCT GGGTCAGGCG AAACGTGTTG TTATCAACAA AGACACCACC ATCATTATTG ATGGCGTAGG CGATGAAGCG GCAATCCAAG GCCGTGTGGC TCAGATTCGT CAGCAGATTG AAGATGCCAC TTCTGACTAC GACAAAGAAA AACTGCAAGA GCGTGTTGCT AAACTGGCTG GCGGCGTTGC CGTTATCAAA GTGGGCGCCG CAACTGAAGT TGAAATGAAA GAGAAGAAAG CACGCGTTGA AGATGCTCTG CACGCAACTC GTGCCGCAGT AGAAGAAGGC GTCGTAGCGG GTGGTGGTGT TGCACTGATT CGTGCAGCTC ACGCTATCGC TGGCCTGAAA GGCGATAACG AAGACCAGAA CGTGGGTATT AAAGTGGCTC TGCGTGCGAT GGAATCTCCA CTGCGTCAGA TCGTGGTTAA CGCGGGTGAA GAAGCCTCTG TTATCGCGAA CAAAGTTAAA GCGGGTGAAG GTAGCTTCGG TTACAACGCT TATACTGAAG AATACGGCGA CATGATCGCG ATGGGTATCT TGGATCCAAC TAAAGTGACG CGTTCTGCTC TGCAGTACGC AGCCTCTATT GCTGGTCTGA TGATTACCAC CGAGTGCATG GTTACTGACC TGCCACGTGA TGACAAAGGT GCTGATATGG GCGCTGGCGG CATGGGTGGT ATGGGCGGCA TGGGCGGCAT GATGTAA
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Protein sequence | MAAKDVKFGN DARIKMLRGV NILADAVKVT LGPKGRNVVL DKSFGSPTIT KDGVSVAREI ELEDKFENMG AQMVKEVASK ANDAAGDGTT TATVLAQSII TEGLKAVAAG MNPMDLKRGI DKAVIAAVEE LKKLSVPCSD SKAIAQVGTI SANSDSTVGE LIAQAMEKVG KEGVITVEEG SGLQDELDVV EGMQFDRGYL SPYFINKPET GSIELESPFI LLADKKISNI REMLPVLEAV AKAGKPLLII AEDVEGEALA TLVVNTMRGI VKVAAVKAPG FGDRRKAMLQ DIATLTAGTV ISEEIGLELE KTTLEDLGQA KRVVINKDTT IIIDGVGDEA AIQGRVAQIR QQIEDATSDY DKEKLQERVA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG VVAGGGVALI RAAHAIAGLK GDNEDQNVGI KVALRAMESP LRQIVVNAGE EASVIANKVK AGEGSFGYNA YTEEYGDMIA MGILDPTKVT RSALQYAASI AGLMITTECM VTDLPRDDKG ADMGAGGMGG MGGMGGMM
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