Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3661 |
Symbol | orn |
ID | 5385844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4127412 |
End bp | 4127957 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640866684 |
Product | oligoribonuclease |
Protein accession | YP_001402615 |
Protein GI | 153949964 |
COG category | [A] RNA processing and modification |
COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000000000474416 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAA ATCAAAATAA TCTGATCTGG ATCGATCTGG AAATGACCGG TCTCGATCCA GAGCGGGATC GCATCATCGA AATCGCTACC TTGGTCACTG ATGCGAATCT TAATATTCTG GCAGAAGGAC CTGTTCTGGC AGTCCATCAA TCTGCTGAAC AGCTTGGGCT AATGGATGAG TGGAATGTTC GTACCCATAC TGGTAGTGGC TTGGTTGAGC GGGTGAAAAC CAGCCCCTTT AATGACCGTG ATGCTGAATT ACAAACTATC GAATTCCTAA AACAGTGGGT CCCCGCGGGG GTTTCACCCA TTTGCGGTAA CAGTGTAGGT CAGGACCGCC GTTTCCTGTT CCGCTACATG CCAGAGCTTG AAGCGTATTT CCATTACCGC TATGTAGATG TCAGTACATT GAAAGAGTTA GCGCGTCGCT GGAAACCTGA AATTCTGGCT GGTTTTAAAA AGCAAAATAC CCATCAGGCA TTGGATGACA TTCGTGAGTC AGTCGCCGAG CTTGCTTACT ATCGTGAGCA TTTTATTCAA TCTTAA
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Protein sequence | MAENQNNLIW IDLEMTGLDP ERDRIIEIAT LVTDANLNIL AEGPVLAVHQ SAEQLGLMDE WNVRTHTGSG LVERVKTSPF NDRDAELQTI EFLKQWVPAG VSPICGNSVG QDRRFLFRYM PELEAYFHYR YVDVSTLKEL ARRWKPEILA GFKKQNTHQA LDDIRESVAE LAYYREHFIQ S
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