Gene YpsIP31758_3613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3613 
SymbolispB 
ID5387042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4078012 
End bp4078983 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content49% 
IMG OID640866633 
Productoctaprenyl diphosphate synthase 
Protein accessionYP_001402567 
Protein GI153949434 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000738852 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTAG AAAAGATTAT CGAGTTAACC GCGCCAGATA TGGCGGCAGT AAATACAACA 
ATTCTCGACC AATTGAACTC TGATGTTGTT CTTATCAATC AATTGGGTCA TTACATTATC
AGCGGTGGTG GAAAACGTAT TCGCCCAATG ATCGCGGTCT TGGTGGCCCG GGCCCTTAAC
TATCAGGGTA GCAAGCATAT CACCGTCGCG GCACTCATCG AGTTTATCCA TACGGCGACA
CTGCTACACG ATGATGTTGT CGATGAATCC GATATGCGGC GTGGCAAAGC GACCGCCAAT
GCCGCATTTG GCAACGCTGC CAGTGTATTG GTCGGCGATT ACATTTATAC GCGCTCATTC
CAGATGATGA CAGGGCTGCA ATCAATGCGA GTGCTGACAT TGATGTCTGA AGCGACAAAC
GTTATCGCCG AAGGTGAGGT ATTACAGTTA ATGAACTGTA ATAACCCAGA CATCACTGAA
GAAAGCTATA TGCAGGTCAT TTACAGCAAA ACAGCACGCT TATTCGAGGC CGCTGCACAA
TCTGCCGCAA TATTGTCAGA TGCCAGTGAG GAGCAGGAAC TGGCATTACA GAACTATGGT
CGTTATCTGG GGACTGCCTT CCAGCTTATT GATGATCTAC TGGATTACAG CGCAGAGGGT
TCCACGTTAG GCAAAAATAC GGGGGATGAC CTGAATGAAG GTAAACCGAC GTTGCCACTG
CTACATGCCA TGCATAATGG CACCCCAGAA CAAGCCGCAA TGATCCGGCA AGCGATTGAA
CAGGGGAATG GCCGTCATTT ACTCGAACCA GTGCTGGCTG CCATGGAGCA TTGTGGCTCT
CTGGTCTATA CCCGTCAGCG TGCTGAAGAA GAAGCAGATA AAGCGATTGC CGCATTGCAC
GCGTTACCTG AAAGTGATTA TCGTCTGGCC CTTGAAGGCT TGGCACATAT CTCAGTGCAC
CGCCGTTTTT GA
 
Protein sequence
MNLEKIIELT APDMAAVNTT ILDQLNSDVV LINQLGHYII SGGGKRIRPM IAVLVARALN 
YQGSKHITVA ALIEFIHTAT LLHDDVVDES DMRRGKATAN AAFGNAASVL VGDYIYTRSF
QMMTGLQSMR VLTLMSEATN VIAEGEVLQL MNCNNPDITE ESYMQVIYSK TARLFEAAAQ
SAAILSDASE EQELALQNYG RYLGTAFQLI DDLLDYSAEG STLGKNTGDD LNEGKPTLPL
LHAMHNGTPE QAAMIRQAIE QGNGRHLLEP VLAAMEHCGS LVYTRQRAEE EADKAIAALH
ALPESDYRLA LEGLAHISVH RRF