Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3608 |
Symbol | basS |
ID | 5386602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 4073755 |
End bp | 4074822 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640866628 |
Product | sensor protein BasS/PmrB |
Protein accession | YP_001402562 |
Protein GI | 153947146 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000000312076 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAGCA TGCGCCGTCG TTTGCTGTTA ATGCTGGCGC TGATTTTACT GGTGACCCAG TTGATCAGCG CATTCTGGCT ATGGCATGAA AGTCAGGAAC AAATAAGTTT TCTGGTCGAT GAAACTCTTA GCGCAAAAGC CCGTAATGAG CAGGTTGATA AAGAAATAGC TGAGGCGATT GCCTCCCTGC TTGCACCGTC GCTAATCATG ATGACAATCA CTCTGCTGCT GTCTTTCTGG GCAATCAGTT GGATTATTCG TCCACTTGAT CAATTACAAC AAAAGTTGGC AGAACGCTCC GCAGATAACC TTTCCCCCTT GGTTGTTAAC AGTGAAATGC AAGAAATTGT CTCTGTTACC TCAACACTCA ATCAATTGTT ATTGCGACTT TCCAATACCA TTCAGCAAGA ACGGTTGTTT ACCGCCGATG CCGCCCATGA ACTGCGTACA CCACTCGCAG GAATACGCCT CCACCTAGAA TTAATGGAAA AGCAGGGAAT TGCCGAGAGT AAATCGCTGA TTAATCGCAT CGATCTGCTA ATGCATACGA TTGAACAGTT ATTAATGCTA TCGAGGGCGG GACAAAATTT TGCTAGTGGC CATTATCAAA CCCTAGATTG GGTTAACGAT GTCGTCCCCC CCTTGCAGGA AGAGCTGGCT GAAATGTGTG AGTTGCGTCG GCAAACAATA CAGTGGGAAT TACCGCCTCA TGCAAAAATG GAAGGTGACG CCACGCTACT ACGCTTGATG CTGCGTAATT TGGTTGAAAA TGCCCACCGC TATAGCCCGG TTGGTAGCCA AATCATCGTC ACTCTTTCCA CTGAAAATCA GGGTGTATTA CTGCAAGTCA CCGATGAAGG CCCAGGGATA AAACAAAATC AGGCTGGTGA ACTAACCCAA GCATTTAGGC GCATGGACCA ACGCTATGGT GGCAGTGGCT TAGGATTGAA TATCGTGATC CGCATTGCCC AGTTACATCA AGGTAAACTT ACGTTGGAAA ACCGCCTTGA TCGTACTGGT CTGAAGGCAC AATGCTGGCT ACCCGCGACC ACTTACAGCC AGAAATAG
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Protein sequence | MISMRRRLLL MLALILLVTQ LISAFWLWHE SQEQISFLVD ETLSAKARNE QVDKEIAEAI ASLLAPSLIM MTITLLLSFW AISWIIRPLD QLQQKLAERS ADNLSPLVVN SEMQEIVSVT STLNQLLLRL SNTIQQERLF TADAAHELRT PLAGIRLHLE LMEKQGIAES KSLINRIDLL MHTIEQLLML SRAGQNFASG HYQTLDWVND VVPPLQEELA EMCELRRQTI QWELPPHAKM EGDATLLRLM LRNLVENAHR YSPVGSQIIV TLSTENQGVL LQVTDEGPGI KQNQAGELTQ AFRRMDQRYG GSGLGLNIVI RIAQLHQGKL TLENRLDRTG LKAQCWLPAT TYSQK
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