Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3602 |
Symbol | hflB |
ID | 5386962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4067720 |
End bp | 4069654 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640866622 |
Product | ATP-dependent metalloprotease |
Protein accession | YP_001402556 |
Protein GI | 153946925 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00000683259 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAA ACCTAATTCT CTGGTTAGTT ATTGCAGTCG TCTTGATGTC TGTATTCCAG AGCTTTGGTC CCAGCGAATC GAATGGCCGT AGAGTGGATT ACTCTACTTT CATGTCCGAC GTAACCCAAG ATCAAGTGCG TGAAGCACGT ATCAACGGAC GTGAAATTAA CGTTAGTAAG AAAGATAACA GCAAATATAC GACTTTTATT CCGGTCAATG ATCCAAAGCT GCTAGATACC TTATTGACTA AAAATGTGAA AGTTGTTGGT GAGCCTCCAG AAGAGCAAAG CTTACTGGCA TCTATCTTTA TATCTTGGTT CCCAATGTTG TTATTGATTG GGGTCTGGAT CTTCTTTATG CGTCAAATGC AGGGCGGCGG TGGCAAAGGA GCAATGTCCT TTGGTAAAAG CAAAGCTCGA ATGCTGACGG AAGATCAGAT AAAAACCTCG TTTGCTGATG TTGCTGGTTG TGACGAAGCA AAAGAAGAGG TCAGTGAATT AGTTGACTAC CTGCGTGAGC CAAGCCGTTT CCAGAAATTG GGCGGTAAAA TTCCTAAAGG CGTGTTGATG GTAGGCCCTC CGGGGACGGG TAAAACCTTG CTGGCGAAAG CCATTGCAGG TGAAGCTAAA GTGCCATTCT TCACAATTTC TGGTTCTGAC TTCGTAGAAA TGTTCGTTGG TGTCGGTGCA TCCCGTGTCC GTGACATGTT TGAACAGGCT AAAAAAGCTG CGCCTTGTAT CATCTTCATT GATGAAATCG ATGCGGTTGG CCGTCAACGT GGCGCTGGTC TGGGTGGGGG TCATGACGAA CGTGAACAGA CGCTGAACCA AATGCTGGTT GAAATGGATG GCTTCGAAGG TAATGAAGGC ATCATTGTTA TTGCGGCAAC TAACCGCCCA GACGTTCTGG ATCCTGCGTT ATTGCGCCCA GGCCGTTTTG ACCGTCAGGT TGTCGTTGGT TTACCTGATG TTCGTGGTCG TGAACAAATT CTGAAAGTTC ACATGCGCCG TGTGCCATTA GATACCGATA TTGATGCTTC AGTGATCGCT CGTGGTACTC CAGGCTTCTC TGGTGCTGAT TTGGCGAACC TGGTAAACGA AGCTGCATTG TTTGCCGCCC GCGGTAACAA ACGCGTTGTT TCTATGGTTG AGTTCGAAAA AGCGAAAGAC AAAATTATGA TGGGTGCGGA ACGTCGCTCC ATGGTAATGA CAGAAGCTCA GAAAGAATCT ACGGCCTACC ATGAAGCAGG GCATGCCATT ATTGGTCGTT TAGTGCCAGA GCATGATCCA GTGCATAAAG TGACGATCAT TCCTCGTGGC CGTGCTCTGG GTGTCACCTT CTTCTTGCCG GAAGGCGATG CAATCAGTGC TAGCCGCCAG AAGTTGGAAA GTCAGATTTC TACCTTGTAC GGTGGTCGTC TTGCAGAAGA GATCATTTAT GGCCCGGAAA AAGTGTCTAC CGGTGCTTCG AATGATATCA AAGTGGCAAC GTCTATTGCG CGTAATATGG TAACGCAGTG GGGCTTCTCC GAAAAACTGG GGCCGTTGCT GTATGCTGAA GAAGAGGGCG AAATTTTCCT CGGCCGTTCT GTAGCGAAAG CTAAGCATAT GTCTGATGAG ACTGCGCGTA TCATCGATCA GGAAGTTAAA TTACTTGTTG AGCGTAACTA TCAGCGTGCA CGTAAATTGT TGTTAGAAAA TATGGATGTT TTACACTCCA TGAAAGACGC GTTGATGAAG TATGAAACTA TTGATGCGCC ACAGATTGAT GACTTGATGA ATCGCAAAGA AGTTCGCCCG CCAGCGGGTT GGGACAATGT GACCAAAAAT AAATCATCTG ACAATGACAA TACACCAACG GCAACCATGC CGGCTGATGA ACCGAATACT CCAACGTCGG GCAATACAGT GTCAGAACAG TTGGGTGATA AGTAA
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Protein sequence | MAKNLILWLV IAVVLMSVFQ SFGPSESNGR RVDYSTFMSD VTQDQVREAR INGREINVSK KDNSKYTTFI PVNDPKLLDT LLTKNVKVVG EPPEEQSLLA SIFISWFPML LLIGVWIFFM RQMQGGGGKG AMSFGKSKAR MLTEDQIKTS FADVAGCDEA KEEVSELVDY LREPSRFQKL GGKIPKGVLM VGPPGTGKTL LAKAIAGEAK VPFFTISGSD FVEMFVGVGA SRVRDMFEQA KKAAPCIIFI DEIDAVGRQR GAGLGGGHDE REQTLNQMLV EMDGFEGNEG IIVIAATNRP DVLDPALLRP GRFDRQVVVG LPDVRGREQI LKVHMRRVPL DTDIDASVIA RGTPGFSGAD LANLVNEAAL FAARGNKRVV SMVEFEKAKD KIMMGAERRS MVMTEAQKES TAYHEAGHAI IGRLVPEHDP VHKVTIIPRG RALGVTFFLP EGDAISASRQ KLESQISTLY GGRLAEEIIY GPEKVSTGAS NDIKVATSIA RNMVTQWGFS EKLGPLLYAE EEGEIFLGRS VAKAKHMSDE TARIIDQEVK LLVERNYQRA RKLLLENMDV LHSMKDALMK YETIDAPQID DLMNRKEVRP PAGWDNVTKN KSSDNDNTPT ATMPADEPNT PTSGNTVSEQ LGDK
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