Gene YpsIP31758_3577 details

Gene Information

• Locus tag: YpsIP31758_3577
• ID: 5385506
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 4037729
• End bp: 4039747
• Gene Length: 2019 bp
• Protein Length: 672 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640866593
• Product: heparinase II/III-like family protein
• Protein accession: YP_001402531
• Protein GI: 153948242

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCAGT TTACGGATCG GCAGATGGTT AAAATCCGCC AGCGCGTTGT GAAACAACCG 
GAGATTATTG CCACGCTGAT CGCCGATAAT CAGGTGGTTT TAGAGACCGA CACACTGGTG 
CCCGCCACCG GTATCGCCAC CTGGAATCAT TACTATTATT GCCCTGAGCA TGGTGTCCAG 
TTGGTATGGG ATCGCTTTTC ACCTCAAGCA CACCGCTGTC CGGTAGATGA TCATCTTTTT 
AGCGGCGAAC CCTACGACGG TGCCTGGTGG CGGGCATTAA ATGGTTTGAA CGCCAAAGCC 
TGCAATCAAC TGGGCTTGCT GTGGCAATTA ACCGGAGAAA TACGTTACTT CGATAAAGTG 
CGGGACATTC TGATGAGTTA TGCCCGCTAC TACCCTGACT ATGAAGTCCA CGGTGGTATT 
CCTTACAACG GGCCGGGTAA GGCGAATGCA CAGACCCTGT GTGAGGCAAA CTGCCTCCTT 
GATTTTGCCT TGGGCTATGA CTTTATCGCT GATACGCTCA GCCAAGAGCA ACGTGATTGT 
CTTGCTGAGC GCTTATTGCG GGTGGGCGCT GATTTCTTAA TGCAACACCG TACCCGTCAG 
TTGCACAACC ATGAAGTTAA AATCAGTAGC GCTATCGCGG TTATTGGCCT GATCCTTGAA 
GAGGAGCACT ACATTGAGTT TGCGGTTAAC GCAGATTACG GCCTGCGCTA CCAGTTAGAG 
CATGGCTTAT TCAACGAAGG GCTGTGGTTT GAAGGCTCGG TGCATTATCA CTTTTATGCA 
CTGCAAGGTT TTTGGTCATT TGAAAAACTG GCGGCCGGTA GCCGCTATAG CCTACTGGCG 
CTGCCCTATT ACCGCGACAT GCTCAGCTTC CCGCTCAAGC TGCTGATGCC CAACGGCACA 
TTCCCGCGCA TTAATGATTG TACCGCCGGG CAAGAGCAAC TTAATCATGC GCATCTGTAT 
GAATTTGCTT ATCAGATCTA CGGCAACCGT GAATATGCGG CGGCCCTGCA ACATATTTAT 
CGCCAGCAAC CCCGTTTAAA TCTGGATGCA CTGCTGTATG GGGCTGAATC ATTACCACTG 
CAAATTATTG ATGTCATCCC GACCGATACA CTACATGCAC CAGATTGCGG ATTAACCATC 
CTACGCCAAC CGCAGGCCAG CCGCGCATTG TTGATAAAAC ACAGCCCGTA TGGCGGCGAG 
CATGATCATT ATGATCGGCT AAATTTAATT CTGTTTGACA GGGGCCACGA AGTCCTGCCC 
GATTTAGGCA CCACCGGTTA TGGTGCACAG CGACATTATG ACTATTACAA AAACAGCGCC 
ACTCACAATA CGCTCAGTAT CAACCAAAAA AATCAGCCTC CTGCAGTGCC TTACATCCGT 
CAATGGCATC AGGCAGCAAA CTTCAGTTGG CTGGATACCG AAGTCGATTG GCGTCAAACC 
GCGCCTGAGT TAGACAGCCA TACCCGCGTA CAATGGGATG AAGCGTCTTA TCGTGATGTT 
AAATTCCGCC GCCGTATTTT ATGGCTGGAA GATACGATTA TCGATATTAG CAATATCGTT 
AATCCCCATC AGCAGTCGTG GAACTGGACG CTGTATATTG ATGGGACTGC GACAGAACAG 
AAAGGTGAAA TGACGTCCTT CGGTGACAGC GGCCCGATGC AGTATGTGCA TCAGGTGACC 
GCCCAACCAC TAAATGGGGT GATACCGTGC CGTTACCAAA CCACAGCACG CCCACTGACA 
CTGTGGTTAG CCGCTGATGC CACGCTATTT CAAGGGCTGG CCCCAGCGAA TCCGTCGGTA 
CGTGATCTCA GCTACCTGAT GTTACGCAAC CAACAACCAG CAGCTCAGGT CACCTGTGTT 
TTTGACTTGA ATGACAGTAA CCCGTTACTG CACGTTGAGG TGGAAACTAA CGGCGAAATA 
TTATCAATAG AATTAATCCG CCAACAGCAA ACCATGCGGA TAAACATTCC TTTAACCAGC 
AACCAACTGC CGCAATTTAG CCAGGCGTAT CCATCTTAG 

 

Protein sequence

MKQFTDRQMV KIRQRVVKQP EIIATLIADN QVVLETDTLV PATGIATWNH YYYCPEHGVQ 
LVWDRFSPQA HRCPVDDHLF SGEPYDGAWW RALNGLNAKA CNQLGLLWQL TGEIRYFDKV 
RDILMSYARY YPDYEVHGGI PYNGPGKANA QTLCEANCLL DFALGYDFIA DTLSQEQRDC 
LAERLLRVGA DFLMQHRTRQ LHNHEVKISS AIAVIGLILE EEHYIEFAVN ADYGLRYQLE 
HGLFNEGLWF EGSVHYHFYA LQGFWSFEKL AAGSRYSLLA LPYYRDMLSF PLKLLMPNGT 
FPRINDCTAG QEQLNHAHLY EFAYQIYGNR EYAAALQHIY RQQPRLNLDA LLYGAESLPL 
QIIDVIPTDT LHAPDCGLTI LRQPQASRAL LIKHSPYGGE HDHYDRLNLI LFDRGHEVLP 
DLGTTGYGAQ RHYDYYKNSA THNTLSINQK NQPPAVPYIR QWHQAANFSW LDTEVDWRQT 
APELDSHTRV QWDEASYRDV KFRRRILWLE DTIIDISNIV NPHQQSWNWT LYIDGTATEQ 
KGEMTSFGDS GPMQYVHQVT AQPLNGVIPC RYQTTARPLT LWLAADATLF QGLAPANPSV 
RDLSYLMLRN QQPAAQVTCV FDLNDSNPLL HVEVETNGEI LSIELIRQQQ TMRINIPLTS 
NQLPQFSQAY PS