Gene YpsIP31758_3572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3572 
Symbol 
ID5384849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp4031740 
End bp4032834 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content52% 
IMG OID640866588 
Productcarbohydrate ABC transporter ATP-binding protein 
Protein accessionYP_001402526 
Protein GI153950809 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATCGG TTGTACTTAA AAATGTGTGT AAATCTTACG GTGACATCCA TGTGATCCGC 
GATGTATCGC TGGAGATCCC TGATGGTGAG TTCTGCGTGC TGGTTGGCCC TAGCGGTTGC 
GGTAAATCCA CCTTACTGCG CATGATTGCC GGGCTGGAGG AGATCTCCGG CGGCACGGTT 
GGCATCAATG ATAAAGATGT CACCGATGTG GAACCGAAGA TGCGTGACAT CGCGATGGTG 
TTCCAAAGTT ATGCGCTTTA TCCCCAGATG ACGGTGCGTG AAAACATGGG ATTCGCCCTG 
AAAATGGCTA AGATGTCCAA AGCCGACATT AACCAAAAGG TCGAATCAAC CGCCGAGTTG 
CTCGGTTTAC AAGCGCTGCT GGAACGCCTG CCAAAAGATT TGTCCGGTGG TCAGCGTCAG 
CGGGTCGCCA TGGGGCGGGC AATTGTGCGT AACCCACAGG TGTTTCTGTT TGATGAGCCA 
CTGTCGAACC TGGATGCCAA ACTACGCACA CAGGTGCGTG GGGAGATCCG CGAACTGCAT 
CAGCGGCTAA AAACCACTTC AGTTTATGTG ACGCATGACC AAATAGAAGC GATGACCATG 
GGCCAGATGA TCGTGGTCCT GCGTGAAGGG CGCATTGAAC AGGTTGGTTC ACCATTGGAC 
TTGTATGACC GCCCGGCTAA CCTGTTTGTT GCTGGCTTTA TTGGATCGCC TGAAATCAAC 
CAGTTAAAAG GCACGGTGGT ACTAGAGGGC GATAAATTCC TGCTGCAATT GGAGGACAAC 
TCATTACTGG CCTTGCCCAC TGGATTGAAC GTCACTGAAG GGCAAAACGT GGTCTACGCC 
ATCCGGCCAG AGCAGGTGAA TGTGGTAGAT GAAACGCACT GTGCCAGCGC ATTGAAAGCG 
ACCATTACGG CGATAGAAAA TACGGGCTCG GATATGCAGC TCTTTTGCAG CACGGGCGGG 
GGCCGCTTTA CCTCTGTATT TAAACAACGT TTAGCGGTGA GCGAAGGGGA AACGGTCTAT 
CTGCAACCTA AGCTTGCGGG TATCCATATC TTTGATGCTG CTACGGGGTT GCGGGTTGAC 
TGCCAGGCGG CATAA
 
Protein sequence
MGSVVLKNVC KSYGDIHVIR DVSLEIPDGE FCVLVGPSGC GKSTLLRMIA GLEEISGGTV 
GINDKDVTDV EPKMRDIAMV FQSYALYPQM TVRENMGFAL KMAKMSKADI NQKVESTAEL 
LGLQALLERL PKDLSGGQRQ RVAMGRAIVR NPQVFLFDEP LSNLDAKLRT QVRGEIRELH 
QRLKTTSVYV THDQIEAMTM GQMIVVLREG RIEQVGSPLD LYDRPANLFV AGFIGSPEIN 
QLKGTVVLEG DKFLLQLEDN SLLALPTGLN VTEGQNVVYA IRPEQVNVVD ETHCASALKA 
TITAIENTGS DMQLFCSTGG GRFTSVFKQR LAVSEGETVY LQPKLAGIHI FDAATGLRVD 
CQAA