| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3540 |
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| Symbol | |
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| ID | 5388453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3999144 |
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| End bp | 4000379 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640866555 |
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| Product | phage integrase family site specific recombinase |
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| Protein accession | YP_001402494 |
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| Protein GI | 153950646 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0000292707 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTGA GTGATGTGAA GGTTCGTTCG GCCAAGCCTG AAGAAAAAGC CTATAAGCTT
ACCGATGGTG ACGGTATGGT GTTACTGGTT CATCCTAACG GCTCAAAGTA CTGGCGGCTG
CGATATCGCT TTGGCGGCAA AGAAAAGATG TTGGCGCTGG GAATATATCC TGAAATATCG
TTGGCAGATG CCAGAGCACG GCGTGACGAA GCTCGTAAGC AGTTAGCTAA CGGTGTGGAC
CCAAGTGAGA GCAAGAAAGC CGTTAAGGTA GAGCAGGAGC AAGAAGCGAT AACTTTTGAA
GTGGTAGCCA GAGAGTGGCA TGCCAGTAAT CGTCAATGGT CAGAAGCTCA CAGTGCTCGA
GTGCTCAAAA GCTTAGAGGA CAATCTCTTT CAATCCATAG GCAAACGGAA TATCACAGAC
CTCGGAACCC GTGATCTTTT ACCTCCCATT AAGGCCGTAG AGATGTCTGG GCGTCTTGAG
GTGGCTTCCC GCCTGCAACA ACGAACCACA GCGATAATGC GCTATGCCGT TCAAAGCGGT
TTAATTGATT ACAACCCCGC GCAGGAGATG GCGGGCGCTG TTGCTACCGG TAAAAGAAAG
CACCGTGCTG CACTTGAGTT AAACCGTGTT TCAGAGTTAC TTCACCGTAT TGACTACTAC
AGTGGCAGGC CACTCACTCG GCTAGCGGTA GAATTGACTT TATTGGTCTT TATCCGTTCC
AGTGAATTAC GCTTTGCCCG TTGGTCAGAA GTAGATTTTG AAACCGCCAT GTGGACCATC
CCTGGAGAGC GTGAACCACT GGAAGGTGTT AAACACTCGC ATCGGGGCTC AAAAATGCGC
ACTCCCCATC TTGTCCCCTT ATCCCGCCAG GCGCTCGCCA TTCTGGAAAA GATCAAAAGC
ATGAGTGGAA ATCGTGAGCT GATTTTTATC GGTGATCACG ACCCACGTAA GCCCATGAGT
GAGAACACGG TGAACAAAGC CCTACGTGTT ATGGGCTACG ATACTAAAGT AGATGTCTGT
GGGCACGGTT TTAGAACTAT GGCCTGTAGT TCATTGATTG AGTCGGGATT GTGGTCTAGG
GATGCAGTAG AAAGGCAGAT GAGTCACCAG GAGCGCAACT CTGTACGTGC GGCTTATATT
CATAAAGCCG AGCACTTAGA TGAGCGTAAA CTGATGATTC AGTGGTGGGC GGATTTTTTT
GGAGGCAAAC AGGCAGCAAG CTATTTCACC TTTTGA
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| Protein sequence | MALSDVKVRS AKPEEKAYKL TDGDGMVLLV HPNGSKYWRL RYRFGGKEKM LALGIYPEIS
LADARARRDE ARKQLANGVD PSESKKAVKV EQEQEAITFE VVAREWHASN RQWSEAHSAR
VLKSLEDNLF QSIGKRNITD LGTRDLLPPI KAVEMSGRLE VASRLQQRTT AIMRYAVQSG
LIDYNPAQEM AGAVATGKRK HRAALELNRV SELLHRIDYY SGRPLTRLAV ELTLLVFIRS
SELRFARWSE VDFETAMWTI PGEREPLEGV KHSHRGSKMR TPHLVPLSRQ ALAILEKIKS
MSGNRELIFI GDHDPRKPMS ENTVNKALRV MGYDTKVDVC GHGFRTMACS SLIESGLWSR
DAVERQMSHQ ERNSVRAAYI HKAEHLDERK LMIQWWADFF GGKQAASYFT F
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