| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3516 |
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| Symbol | |
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| ID | 5387761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3970231 |
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| End bp | 3971394 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640866532 |
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| Product | putative lipopolysaccharide heptosyltransferase III |
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| Protein accession | YP_001402471 |
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| Protein GI | 153949339 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02201] lipopolysaccharide heptosyltransferase III, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAATA CATCAAATAA GACAGCATCA CCTGCCGGGC AACTTTCTGC TCCCGCTTCT
CAAACCGGTG CCAGCCACTT GCCGGAAGTA CTGCGGAATA AAGAGCATGT TGCGCGCATT
TTAGTGATTA AGTTACGGCA TTTCGGCGAT GTTCTACTGA CGACGCCGCT ACTGAGTACG
CTGAAAGCCA ATTATCCGCA GGCTAAAATC GATGTACTGC TGTATGGCGG TACGCAGGAT
ATGTTGCGTG AAAACAAGGC GATCAATCAT GCCTTTATTG TTGATCGGGG CCTGAAGCAT
GCAGGATTAA AGGCGCAAAT CAGTGGCGAA AAAGCACTGT TTAGCGCCCT AAAAAAACAA
CATTATGATT TGATTCTTAA TTTATCCGAT CAATGGCGGG CTGCGGCGTA TTGCCGTTTG
TTAAAACCCA CGTTTAGTAT CGGTTTCCAC TACCCGAAAC GGGATACCTG GCTCTGGCGT
TACTGCCATT CCACATTGGT TGAGATCCCT AATGCTGCAG AACGGCACAC GGTACTCAAT
AATCTGGATA TTCTCTCACC ACTACAACTG ACCGACATCA GGACCGACGT CACCATGTCC
TATGGGCTGC ATGATATCGA GCGGGCAAAG CAGTTGTGCC AACAGCATAA TATTGAACAC
TATATTTTGA TTCAGCCTTC CGCCCGCTGG AAATTCAAAA CCTGGGCCAG CGAATCCTTC
AGTGAATTGA TCAACCACCT CACTCAACAA GGTGAAACTG TTCTGCTGAC GGGCAGTAAA
GATCAGGCTG AATTGGATTA CATCGCTGAG ATTATTGCTG GCTGCACACA ACCGGAAAAG
GTGATCAATT TATCGGGTCA ATTGGCATTG CCTGAACTGG CGGTCTTAAT TGATAACGCC
AAATTATTTA TTGGTGTTGA TTCTGTGGCA ATGCATATGG CTGCTGCGTT ACAGACGCCA
GCAGTGGTAC TATTTGGCCC GAGTAATCTT AATCAATGGC ACCCGTGGCA GGCTCCACAT
ACTTTACTCT GGGCTGGCAA TTACCGCACT TTGCCGCATC CCAATGAAAT AGATACTGAC
ACTACTGATC GCTATCTGAA CGCAATCCCA GTTAGTGATG TCATAGACGC AGTTGATTCC
TGGCGAGTTG CCAAAGGGAA TTAG
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| Protein sequence | MINTSNKTAS PAGQLSAPAS QTGASHLPEV LRNKEHVARI LVIKLRHFGD VLLTTPLLST
LKANYPQAKI DVLLYGGTQD MLRENKAINH AFIVDRGLKH AGLKAQISGE KALFSALKKQ
HYDLILNLSD QWRAAAYCRL LKPTFSIGFH YPKRDTWLWR YCHSTLVEIP NAAERHTVLN
NLDILSPLQL TDIRTDVTMS YGLHDIERAK QLCQQHNIEH YILIQPSARW KFKTWASESF
SELINHLTQQ GETVLLTGSK DQAELDYIAE IIAGCTQPEK VINLSGQLAL PELAVLIDNA
KLFIGVDSVA MHMAAALQTP AVVLFGPSNL NQWHPWQAPH TLLWAGNYRT LPHPNEIDTD
TTDRYLNAIP VSDVIDAVDS WRVAKGN
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