| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3515 |
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| Symbol | |
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| ID | 5384916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3968951 |
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| End bp | 3970183 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640866531 |
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| Product | O-antigen polymerase domain-containing protein |
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| Protein accession | YP_001402470 |
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| Protein GI | 153948395 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACTT TATCACCGGC AATTCCGGTC AATCGCCGTA GTGAAATGCT GTGCAGCATA
GCAGCGTTAC TCTTAGGTAT TAGTATGCCA ACGAATAATC AGCTAATGAG TGTTTCATTG
GTTTTGATTA TTATCAGTTT GATCATTAAC CGAAAATCCC TTGATTTTAA ACCGTTGCTC
ACCAGTCCAT TAGTCTATCT ACCGGCAGCT ATGTTTGTGT TACTGGCGTT ATCATTGTTG
TATCAAAACA ACAGCTATGG CCCGGATATG GTAGGAAAAT ATAAGAAACT TCTTTATATC
TTGCCATTGG CCCTGTTCTT TATGAACCAG CCACGGTTGA TCAAACTGTT CTGTACCGGC
TTTCTCGTCG CTAACGCTGT CATATTGGCC GGATCTCTGG CCGTGGGTGT TTTACACATT
CCGTTGAGTG GTGTGGACCC CACTAACCCG ACCATTTTTA AACTGCAAAT TACCCAAAAC
TTCTTTATGG CGCTGGCGGC GTTACTCTGG CTGGTACTGG CGTTTCAACA TCAGGGGTGG
AAACGTTGGG GTTACAGTGT GTTAGTGGTG GCCGCAAGTT ACAGCATCTT ATTCTTGGTA
TTGGGCCGCA CCGGTTATGT TGCCTTGATA GTGGGTTTAG GGGTATGGCT ATTTTTCTCT
CTGGGCAATC GCCAGCGGTT AACACTGGTC GTGCTAGGTG CATTGGCCTT TGCTGCCCTG
ATCTTTATCC CGAACAAAGC CACAGATCGT ATCGTACAGG GCGTTGATGA GATAAAAGTG
TGTATGGCCG CATCGGCAAC TGATGCCGCA GACGCATGTA ATTCCTCCAT GGGGCAGCGT
TCTGCTTTTG TGGTTGAAGC TGCCCGGTTA ATTAAAGAAT CACCTATTCT TGGTCATGGC
GCGGGTGGTT TTTATTATGA AAATAAAGAA GTGGACTACA AAGTCAATAA CCCGCACAAC
CAGTATCTAC TGGAAACGAT TCAATCAGGT GTGATTGGTC TATTCCTCTT TTTGGCGTGG
GTTATCTGCT GTTATCGTGT TATTTGGCAG CAAACACCGG CTCTGCGCAA TGTGCTGTTG
GCGGTATTGA CCAGTTATAT GGCATGTAAC TTCTTCAATT CATTTCTGCT GGATTCGTCT
GAAGGCCACT TGTTTATGAT TTTTGTGGCG GTTCTGGCGG GCTATTCGGT GAGCGGTTCT
CAATCCATAG CAGGTAAACG GCTGCCAACG TAG
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| Protein sequence | MTTLSPAIPV NRRSEMLCSI AALLLGISMP TNNQLMSVSL VLIIISLIIN RKSLDFKPLL
TSPLVYLPAA MFVLLALSLL YQNNSYGPDM VGKYKKLLYI LPLALFFMNQ PRLIKLFCTG
FLVANAVILA GSLAVGVLHI PLSGVDPTNP TIFKLQITQN FFMALAALLW LVLAFQHQGW
KRWGYSVLVV AASYSILFLV LGRTGYVALI VGLGVWLFFS LGNRQRLTLV VLGALAFAAL
IFIPNKATDR IVQGVDEIKV CMAASATDAA DACNSSMGQR SAFVVEAARL IKESPILGHG
AGGFYYENKE VDYKVNNPHN QYLLETIQSG VIGLFLFLAW VICCYRVIWQ QTPALRNVLL
AVLTSYMACN FFNSFLLDSS EGHLFMIFVA VLAGYSVSGS QSIAGKRLPT
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