Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3473 |
Symbol | |
ID | 5385505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 3915854 |
End bp | 3916630 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640866486 |
Product | hypothetical protein |
Protein accession | YP_001402428 |
Protein GI | 153948154 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 0.957254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTATTA TTATCTCCCC GGCCAAAACG CTTGATTATC AAAGCCCCTT AGCGACAACG AAATTTAGCC AACCTGAAAT GTTGGATAAA TCACAAGCAT TGATTGAGAT ATGCCGCGAG CTAACCCCGG CTCAAATCAG CAGCCTGATG GGGATTAGCG ATAAACTGGC AGGTTTAAAT GCCGCTCGAT TCAGTGAATG GCAGCCTGAT TTCACACCCG CAAATGCGCG TCAGGCTATT CTGGCTTTTA AAGGTGACGT CTATACCGGG ATGCAGGCCG AAAGTTTCAG TGAAGCTGAT TTTGACTTTG CACAACAGCA TTTGCGTATG TTGTCAGGTT TATACGGTCT GCTGCGCCCG CTAGATTTAA TGCAACCTTA TCGTTTAGAG ATGGGGACTA AGCTGGCTAA CCCACGCGGC AAAGATCTTT ATGCCTTTTG GGGCGATCAG ATAACCGAGA AACTTAATCA GGCGCTGGAA CTGCAAGGCG ATAATATTCT GATTAATTTG GCGTCCGATG AGTATTTTAA GGCTGTTAAA CCCGCTAAAT TAAGCGGTTC ACTGATTAAA CCGGTATTTT TGGATGAGAA AAACGGTAAG TACAAAATAA TCAGTTTCTA CGCGAAGAAA GCCCGTGGCC TGATGAGCCG CTTTATTATT CAGAATAAGT TAACCAAACC AGAGCAATTG GTTGATTTTA ATCTGGAAGG CTATGAATTT GATGCGGGAT TATCGGCGAA AAACGAACTC GTGTTTAAAC GGGCTGAACA GCACTAA
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Protein sequence | MLIIISPAKT LDYQSPLATT KFSQPEMLDK SQALIEICRE LTPAQISSLM GISDKLAGLN AARFSEWQPD FTPANARQAI LAFKGDVYTG MQAESFSEAD FDFAQQHLRM LSGLYGLLRP LDLMQPYRLE MGTKLANPRG KDLYAFWGDQ ITEKLNQALE LQGDNILINL ASDEYFKAVK PAKLSGSLIK PVFLDEKNGK YKIISFYAKK ARGLMSRFII QNKLTKPEQL VDFNLEGYEF DAGLSAKNEL VFKRAEQH
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